Escherichia coli SH19PTE6 |
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Putative Escherichia coli SH19PTE6 RM systems
Ref: Wang,J. unpublished
REBASE ref # 9334
| Sequence length: | GenBank #: | |
| Chromosome: | 4,699,374 bp | CP073768 |
| plasmid pYUSHP6-2: | 67,125 bp | CP073769 |
| plasmid pYUSHP6-3: | 64,665 bp | CP073770 |
REBASE acronym: EcoPTE6
Org_num: 47734
All begin KEH54_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19795 | IS3-like element IS2 family transposase | |||
| 19800 | M | M.EcoYPE3ORF20380P (100% identity) | M.EcoPTE6ORF19800P | |
| 19805 | S | S.EcoYPE3ORF20380P (100% identity) | S.EcoPTE6ORF19800P | |
| 19810 | R | EcoYPE3ORF20380P (100% identity) | EcoPTE6ORF19800P | |
| 19820 | NADPH-dependent aldehyde reductase Ahr | |||
| plasmid pYUSHP6-3 | ||||
| 23400 | type II toxin-antitoxin system Phd/YefM family | |||
| 23405 | M | M.EcoE31ORFEP (99% identity) | GAANNNNNNTAYG | M.EcoPTE6ORF23405P |
| 23410 | S | S.Ecoi162ORF4671P (100% identity) | GAANNNNNNTAYG | S.EcoPTE6ORF23405P |
| 23415 | R | EcoE31ORFEP (100% identity) | GAANNNNNNTAYG | EcoPTE6ORF23405P |
| 23420 | IS1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1690 | cell division protein DamX | |||
| 1695 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoPTE6DamP |
| 1700 | ribulose-phosphate 3-epimerase | |||
| 2330 | DUF2556 family protein | |||
| 2335 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoPTE6ORF2335P |
| 2340 | DNA-binding transcriptional regulator Fis | |||
| 8910 | HNH endonuclease | |||
| ??? | M | M.EcoS944ORF17230P (98% identity) | GATC | M.EcoPTE6ORF8915P |
| 8920 | NinE family protein | |||
| 9365 | phosphohydrolase | |||
| 9370 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoPTE6DcmP |
| 9375 | V | V.SsoSE61DcmP (100% identity) | V.EcoPTE6DcmP | |
| 9380 | drug/metabolite exporter YedA | |||
| 17685 | 379 aa hypothetical protein | |||
| 17690 | R | EcoTIF10ORFCP (100% identity) | EcoPTE6ORF17695P | |
| 17695 | M | M.EcoSTB201ORF17690P (100% identity) | M.EcoPTE6ORF17695P | |
| 17700 | 257 aa hypothetical protein | |||
| 19770 | HNH endonuclease | |||
| 19775 | R | SflFF17ORF19275P (100% identity) | EcoPTE6ORF19775P | |
| 19780 | McrC family protein | |||
| plasmid pYUSHP6-2 | ||||
| 22755 | 97 aa hypothetical protein | |||
| 22760 | M | M.Xca80ORFEP (100% identity) | M.EcoPTE6ORF22760P | |
| 22765 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19775 | HNH endonuclease | |||
| 19780 | R | EcoYPE3McrCP (100% identity) | EcoPTE6McrCP | |
| 19785 | McrB family protein | |||
| 19780 | McrC family protein | |||
| 19785 | R | EcoYPE3McrBP (100% identity) | EcoPTE6McrBP | |
| 19790 | DUF4942 domain-containing protein | |||