Escherichia coli 391778 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli 391778 RM systems
Ref: Greig,D.R. et al. unpublished
REBASE ref # 31809
| Sequence length: | GenBank #: | |
| Chromosome: | 5,527,979 bp | CP073619 |
| plasmid p391778: | 92,954 bp | CP073620 |
REBASE acronym: Eco391778
Org_num: 46510
All begin C7G46_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3360 | endoribonuclease SymE | |||
| 3365 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco391778ORF3370P |
| 3370 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco391778ORF3370P |
| 3375 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco391778ORF3370P |
| 3380 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1875 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco391778ORF1880P | |
| 1885 | Eae protein | |||
| 3105 | transposase | |||
| 3110 | R | Ecos1613ORF26795P (100% identity) | Eco391778ORF3110P | |
| 3115 | N-acetylneuraminic acid mutarotase | |||
| 3145 | DEAD/DEAH box helicase | |||
| 3150 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco391778ORF3150P |
| 12410 | TrmB family transcriptional regulator | |||
| 12415 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco391778ORF12415P | |
| 12430 | DUF1737 domain-containing protein | |||
| 16985 | drug/metabolite exporter YedA | |||
| 16990 | V | V.EcosPA8DcmP (100% identity) | V.Eco391778DcmP | |
| 16995 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco391778DcmP |
| 17000 | phosphohydrolase | |||
| 17835 | NinE family protein | |||
| 17840 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco391778ORF17840P |
| 17845 | recombination protein NinB | |||
| 24905 | DNA-binding transcriptional regulator Fis | |||
| 24910 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco391778ORF24910P |
| 24915 | DUF2556 family protein | |||
| 25425 | ribulose-phosphate 3-epimerase | |||
| 25430 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco391778DamP |
| 25435 | cell division protein DamX | |||
| plasmid p391778 | ||||
| 27770 | 101 aa hypothetical protein | |||
| 27775 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco391778ORF27775P | |
| 27780 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3345 | DUF1127 domain-containing protein | |||
| 3350 | R | Ecos1613GmrSP (100% identity) | Eco391778GmrSP | |
| 3355 | R | EcosPA8GmrSDP (55% identity) | Eco391778GmrDP | |
| 3360 | endoribonuclease SymE | |||