Prevotella denticola F0105 |
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Putative Prevotella denticola F0105 RM systems
Ref: Johnston,C.D. et al. unpublished
REBASE ref # 31062
Complete sequence: 3,027,740 bp
GenBank #: CP073339
REBASE acronym: PdeF0105
Org_num: 48645
All begin J5A64_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 385 | 349 aa hypothetical protein | |||
| 390 | R | Pni630IIP (96% identity) | CGAYNNNNNNRTC | PdeF0105IP |
| 395 | M | M.TfoUB4ORF1641P (95% identity) | CGAYNNNNNNRTC | M.PdeF0105I |
| 400 | DUF1016 family protein | |||
| 405 | S | S2.Bfr526ORF9460P (51% identity) | CGAYNNNNNNRTC | S2.PdeF0105I |
| 410 | S | S2.PdeF0115ORF540P (60% identity) | S3.PdeF0105IP | |
| 415 | tyrosine-type recombinase/integrase | |||
| 420 | S | S2.Pni630II (56% identity) | S4.PdeF0105IP | |
| 425 | 50 aa hypothetical protein | |||
| 12135 | tyrosine-type recombinase/integrase | |||
| 12140 | S | S1.Pme0516ORF1380P (57% identity) | S.PdeF0105ORF12140P | |
| 12145 | restriction endonuclease subunit S | |||
| 12140 | restriction endonuclease subunit S | |||
| 12145 | S | S1.PmeBin10ORFDP (45% identity) | S.PdeF0105ORF12145P | |
| 12150 | 165 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7325 | class I SAM-dependent DNA methyltransferase | |||
| 7330 | RM | Pde289ORF1801P (61% identity) | PdeF0105ORF7330P | |
| 7335 | IS1380 family transposase | |||
| 8530 | ATP-binding protein | |||
| 8535 | RM | PdeF0119ORF6580CP (61% identity) | PdeF0105ORF8535P | |
| 8540 | DEAD/DEAH box helicase family protein | |||
| 9770 | IS4 family transposase | |||
| 9775 | M | M2.PdeF0119ORF4980P (98% identity) | M1.PdeF0105ORF9775P | |
| 9780 | R | PdeF0119ORF4980P (97% identity) | PdeF0105ORF9775P | |
| 9785 | M | M1.PdeF0119ORF4980P (98% identity) | M2.PdeF0105ORF9775P | |
| 9790 | outer membrane protein assembly factor BamD | |||
| 11735 | thymidylate synthase | |||
| 11740 | M | M.Pbi7880ORF1910P (93% identity) | M.PdeF0105ORF11740P | |
| 11745 | 80 aa hypothetical protein | |||