Bifidobacterium longum I2-2-3 |
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Putative Bifidobacterium longum I2-2-3 RM systems
Ref: Guan,J. unpublished
REBASE ref # 31900
| Sequence length: | GenBank #: | |
| Chromosome: | 2,363,175 bp | CP065397 |
| plasmid p1: | 198,121 bp | CP065398 |
REBASE acronym: BloI223
Org_num: 47007
All begin I3K78_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4525 | tyrosine-type recombinase/integrase | |||
| 4530 | S | S2.BloK2214ORF4510P (100% identity) | S2.BloI223ORF4540P | |
| 4535 | S | S1.BloK2214ORF4510P (100% identity) | ACAYNNNNGTC | S1.BloI223ORF4540P |
| 4540 | M | M.BloK2214ORF4510P (100% identity) | M.BloI223ORF4540P | |
| 4545 | R | BloK2214ORF4510P (100% identity) | BloI223ORF4540P | |
| 4550 | 94 aa hypothetical protein | |||
| 7350 | methionine adenosyltransferase | |||
| 7355 | R | BloK2214ORF7330P (100% identity) | BloI223ORF7370P | |
| 7360 | DNA binding domain-containing protein | |||
| 7365 | S | S1.BloK2214ORF7330P (100% identity) | S1.BloI223ORF7370P | |
| 7370 | M | M.BloK2214ORF7330P (100% identity) | M.BloI223ORF7370P | |
| ??? | S | S2.BloK2214ORF7330P (100% identity) | S2.BloI223ORF7370P | |
| 7385 | site-specific integrase | |||
| 7390 | S | S3.BloK2214ORF7330P (100% identity) | S3.BloI223ORF7370P | |
| 7395 | mupirocin-resistant isoleucine--tRNA ligase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5475 | Fic family protein | |||
| 5480 | M | M.Bps11027ORF8990P (100% identity) | CCWGG | M.BloI223ORF5480P |
| 5485 | R | BloNORF1473P (100% identity) | CCWGG | BloI223ORF5480P |
| 5490 | plasmid mobilization relaxosome protein MobC | |||
| plasmid p1 | ||||
| 10040 | HigA family addiction module antidote protein | |||
| 10045 | M | M.BloK2214ORF9850P (100% identity) | M.BloI223ORF10045P | |
| 10050 | single-stranded DNA-binding protein | |||
| 10075 | 327 aa hypothetical protein | |||
| 10080 | RM | BloK2214ORF9815P (100% identity) | BloI223ORF10080P | |
| 10085 | Eco57I restriction-modification methylase | |||
| 10160 | addiction module antidote protein | |||
| 10165 | M | M.BloK2214ORF10880P (100% identity) | M.BloI223ORF10165P | |
| 10170 | 264 aa hypothetical protein | |||
| 10635 | IS30 family transposase | |||
| 10640 | M | M.BloK2214ORF10405P (100% identity) | M.BloI223ORF10640P | |
| 10645 | 60 aa hypothetical protein | |||
| 10840 | DUF3841 domain-containing protein | |||
| 10845 | RM | BloK2214ORF10200P (100% identity) | GACCAG | BloI223ORF10845P |
| 10850 | 145 aa hypothetical protein | |||