Escherichia coli E166 |
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Putative Escherichia coli E166 RM systems
Ref: Zhuge,X. unpublished
REBASE ref # 29337
| Sequence length: | GenBank #: | |
| Chromosome: | 4,889,222 bp | CP032066 |
| plasmid p.E166-P1: | 157,787 bp | CP032067 |
| plasmid p.E166-P2: | 163,224 bp | CP032068 |
REBASE acronym: EcoE166
Org_num: 46544
All begin D2J89_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5020 | restriction endonuclease | |||
| 5025 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | EcoE166ORF5030P |
| 5030 | M | M.Ecoppa1ORF6185P (100% identity) | CCANNNNNNNCTTC | M.EcoE166ORF5030P |
| 5035 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.EcoE166ORF5030P |
| 5040 | endoribonuclease SymE | |||
| 13425 | 65 aa hypothetical protein | |||
| 13430 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | EcoE166ORF13435P |
| 13435 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.EcoE166ORF13435P |
| 13440 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.EcoE166ORF13435P |
| 13445 | 540 aa hypothetical protein | |||
| plasmid p.E166-P1 | ||||
| 25555 | type II toxin-antitoxin system Phd/YefM family | |||
| 25560 | M | M.SspS13ORF175P (100% identity) | M.EcoE166ORF25560P | |
| 25565 | S | S.SspS13ORF175P (100% identity) | S.EcoE166ORF25560P | |
| 25570 | R | EcoXHORF21684P (100% identity) | EcoE166ORF25560P | |
| 25575 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 260 | NinE family protein | |||
| 265 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoE166ORF265P |
| 270 | recombination protein NinB | |||
| 10920 | cell division protein DamX | |||
| 10925 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoE166DamP |
| 10930 | ribulose-phosphate 3-epimerase | |||
| 11550 | DUF2556 domain-containing protein | |||
| 11555 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.EcoE166ORF11555P |
| 11560 | Fis family transcriptional regulator | |||
| 18960 | phosphohydrolase | |||
| 18965 | M | M.SflWW1DcmP (100% identity) | CCWGG | M.EcoE166DcmP |
| 18970 | V | V.SsoSE61DcmP (100% identity) | V.EcoE166DcmP | |
| 18975 | EamA family transporter | |||
| plasmid p.E166-P2 | ||||
| 26510 | 59 aa hypothetical protein | |||
| 26515 | M | M.Sen527ORF25750P (100% identity) | M.EcoE166ORF26515P | |
| 26520 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5015 | GTPase | |||
| 5020 | R | EcosS1MrrP (100% identity) | EcoE166MrrP | |
| 5025 | type I restriction-modification system | |||