Prevotella denticola F0119 |
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Putative Prevotella denticola F0119 RM systems
Ref: Johnston,C.D. et al. unpublished
REBASE ref # 31062
Complete sequence: 3,038,072 bp
GenBank #: CP072373
REBASE acronym: PdeF0119
Org_num: 48647
All begin J4855_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1555 | Fic family protein | |||
| 1560 | M | M.Pde1525I (98% identity) | GAGNNNNNCTT | M.PdeF0119I |
| 1565 | S | S.Pde1525I (98% identity) | GAGNNNNNCTT | S.PdeF0119I |
| 1570 | 609 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4975 | outer membrane protein assembly factor BamD | |||
| 4980 | M | M2.PdeF0105ORF9775P (98% identity) | M1.PdeF0119ORF4980P | |
| 4985 | R | PdeF0105ORF9775P (97% identity) | PdeF0119ORF4980P | |
| 4990 | M | M1.PdeF0105ORF9775P (98% identity) | M2.PdeF0119ORF4980P | |
| 4995 | excinuclease ABC subunit UvrB | |||
| 5940 | flavodoxin domain-containing protein | |||
| 5945 | M | M.PdeF0115ORF11895P (99% identity) | M.PdeF0119ORF5945P | |
| 5950 | R | PdeF0115ORF11895P (99% identity) | PdeF0119ORF5945P | |
| 5955 | alpha-amylase | |||
| 6230 | replication-associated recombination protein A | |||
| 6235 | R | PdeF0115ORF12320P (99% identity) | PdeF0119ORF6240P | |
| 6240 | M | M.PdeF0115ORF12320P (100% identity) | M.PdeF0119ORF6240P | |
| 6245 | pyridoxamine 5-phosphate oxidase family | |||
| 6575 | master DNA invertase Mpi family serine-type | |||
| 6580 | RM | PdeF0105ORF8535P (29% identity) | PdeF0119ORF6580AP | |
| 6585 | ATP-binding protein | |||
| 6590 | RM | GurRORF1723P (10% identity) | PdeF0119ORF6580BP | |
| 6595 | RM | PdeF0115ORF8145P (65% identity) | PdeF0119ORF6580CP | |
| 6600 | DEAD/DEAH box helicase family protein | |||
| 6665 | CpXC domain-containing protein | |||
| 6670 | S | S.PinZORFGP (46% identity) | S.PdeF0119ORF6675P | |
| 6675 | M | M.Bth498ORF4455P (95% identity) | M.PdeF0119ORF6675P | |
| 6680 | helix-turn-helix transcriptional regulator | |||