Prevotella jejuni F0106 |
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Putative Prevotella jejuni F0106 RM systems
Ref: Johnston,C.D. et al. unpublished
REBASE ref # 31062
| Sequence length: | GenBank #: | |
| chromosome 1: | 2,229,982 bp | CP072365 |
| chromosome 2: | 1,885,551 bp | CP072366 |
REBASE acronym: PjeF0106
Org_num: 48651
All begin J5A63_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1315 | 214 aa hypothetical protein | |||
| 1320 | R | Pje697IIP (97% identity) | CMANNNNNNCTC | PjeF0106VIIIP |
| 1325 | S | S.Pje333ORF6385P (58% identity) | CMANNNNNNCTC | S.PjeF0106VIII |
| 1330 | M | M.Pje697II (98% identity) | CMANNNNNNCTC | M.PjeF0106VIII |
| 1335 | 102 aa hypothetical protein | |||
| chromosome 2 | ||||
| 12840 | Abi family protein | |||
| 12845 | M | M.Pje697V (98% identity) | GAGNNNNCTT | M.PjeF0106IV |
| 12850 | S | S.Pme0300II (52% identity) | GAGNNNNCTT | S.PjeF0106IV |
| 12855 | R | PmeOORF7006P (99% identity) | GAGNNNNCTT | PjeF0106IVP |
| 12860 | family 43 glycosylhydrolase | |||
| 13060 | virulence RhuM family protein | |||
| 13065 | R | Pgi49417ORF7780P (98% identity) | CAYNNNNNCTC | PjeF0106VIIP |
| 13070 | AAA family ATPase | |||
| 13075 | S | S.Pin2836ORF11290P (59% identity) | CAYNNNNNCTC | S.PjeF0106VII |
| 13080 | M | M.Pgi49417ORF7780P (96% identity) | CAYNNNNNCTC | M.PjeF0106VII |
| 13085 | DUF3853 family protein | |||
| 13245 | DUF488 domain-containing protein | |||
| 13250 | R | PspF0648IIIP (97% identity) | ACCNNNNNGCT | PjeF0106VP |
| 13255 | S | S.PspF0648III (57% identity) | ACCNNNNNGCT | S.PjeF0106V |
| 13260 | M | M.PspF0648III (98% identity) | ACCNNNNNGCT | M.PjeF0106V |
| 13265 | WYL domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 980 | DNA binding domain-containing protein | |||
| 985 | S | S.Bfi13345ORF21760P (61% identity) | CCANNNNNTAG | S.PjeF0106II |
| 990 | M | M.Bfi13345ORF21760P (96% identity) | CCANNNNNTAG | M.PjeF0106II |
| 995 | helix-turn-helix transcriptional regulator | |||
| 1145 | 58 aa hypothetical protein | |||
| 1150 | M | M.Pca2762ORF5335P (49% identity) | CTGAAG | M.PjeF0106VI |
| 1155 | RM | Pje697VI (98% identity) | CTGAAG | PjeF0106VI |
| 1160 | IS30 family transposase | |||
| 2310 | ankyrin repeat domain-containing protein | |||
| 2315 | M | M2.Pje697ORF5745P (99% identity) | M1.PjeF0106ORF2315P | |
| ??? | R | Psp313ORFIP (98% identity) | PjeF0106ORF2315P | |
| 2325 | M | M1.Pje697ORF5745P (98% identity) | M2.PjeF0106ORF2315P | |
| 2330 | DUF3857 domain-containing protein | |||
| 2345 | helix-turn-helix transcriptional regulator | |||
| ??? | M | M.Pde13067II (99% identity) | M.PjeF0106ORF2350P | |
| 2355 | R | Pde13067IIP (99% identity) | PjeF0106ORF2350P | |
| 2360 | 124 aa hypothetical protein | |||
| 5995 | zinc-dependent metalloprotease | |||
| 6000 | M | M.PspF0648IV (98% identity) | TTTAAA | M.PjeF0106III |
| 6005 | outer membrane beta-barrel protein | |||
| 6375 | AAA family ATPase | |||
| 6380 | RM | Pco7716ORF2780P (48% identity) | PjeF0106ORF6380P | |
| 6385 | DNA binding domain-containing protein | |||
| chromosome 2 | ||||
| 14885 | transcriptional regulator | |||
| 14890 | RM | Rmi15922ORFGP (43% identity) | PjeF0106ORF14895P | |
| 14895 | M | M.Tpu846ORF4525P (22% identity) | M.PjeF0106ORF14895P | |
| 14900 | helix-turn-helix transcriptional regulator | |||
| 14920 | 437 aa hypothetical protein | |||
| 14925 | M | M.Pje333ORF13865P (98% identity) | CATATG | M.PjeF0106I |
| 14930 | R | Pje697IP (94% identity) | CATATG | PjeF0106IP |
| 14935 | F0F1 ATP synthase subunit gamma | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 14490 | SusF/SusE family outer membrane protein | |||
| 14495 | R | PspF0648McrCP (95% identity) | PjeF0106McrCP | |
| 14500 | R | Pje333McrBP (85% identity) | PjeF0106McrBP | |
| 14505 | 210 aa hypothetical protein | |||