Prevotella melaninogenica F0054 |
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Putative Prevotella melaninogenica F0054 RM systems
Ref: Johnston,C.D. et al. unpublished
REBASE ref # 31062
| Sequence length: | GenBank #: | |
| chromosome 1: | 1,964,469 bp | CP072361 |
| chromosome 2: | 1,393,830 bp | CP072362 |
REBASE acronym: Pme0054
Org_num: 48655
All begin J5A58_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 3080 | 139 aa hypothetical protein | |||
| 3085 | S | S3.Mba108610ORFMP (16% identity) | S4.Pme0054ORF3120P | |
| 3090 | tyrosine-type recombinase/integrase | |||
| 3095 | S | S3.PpoPP011ORFCP (88% identity) | S3.Pme0054ORF3120P | |
| 3105 | S | S3.Pin14ORF445P (89% identity) | S2.Pme0054ORF3120P | |
| 3110 | ATP-binding protein | |||
| 3115 | S | S1.PpoPP011ORFCP (90% identity) | S1.Pme0054ORF3120P | |
| 3120 | M | M.Bfr584ORF4680P (99% identity) | M.Pme0054ORF3120P | |
| 3125 | R | PspF0043IP (98% identity) | Pme0054ORF3120P | |
| 3130 | helix-turn-helix transcriptional regulator | |||
| chromosome 2 | ||||
| 12985 | TolC family protein | |||
| 12990 | R | Psc361BORFAP (97% identity) | Pme0054ORF13010P | |
| 12995 | four helix bundle suffix domain-containing | |||
| 13000 | S | S.Gha1500ORF6790P (26% identity) | S.Pme0054ORF13010P | |
| 13005 | ORF6N domain-containing protein | |||
| 13010 | M | M.Pme0091ORF2685P (99% identity) | M.Pme0054ORF13010P | |
| 13015 | MBL fold metallo-hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 305 | TIGR00730 family Rossman fold protein | |||
| 310 | R | PfuW1435ORF8410P (85% identity) | Pme0054ORF315P | |
| 315 | M | M.PfuW1435ORF8410P (95% identity) | M.Pme0054ORF315P | |
| 320 | 54 aa hypothetical protein | |||
| chromosome 2 | ||||
| 8095 | 51 aa hypothetical protein | |||
| 8100 | M | M2.Pin2838ORF11420P (100% identity) | M.Pme0054ORF8100P | |
| 8105 | DUF3883 domain-containing protein | |||
| 8100 | DNA cytosine methyltransferase | |||
| 8105 | R | Pin2838ORF11420P (99% identity) | Pme0054ORF8110P | |
| 8110 | M | M1.Pin2838ORF11420P (99% identity) | M.Pme0054ORF8110P | |
| 8115 | NERD domain-containing protein | |||
| 12340 | ferrous iron transport protein B | |||
| 12345 | R | Psc361BIIIP (99% identity) | CTRYAG | Pme0054IP |
| 12350 | M | M.Psc361BIII (99% identity) | CTRYAG | M.Pme0054I |
| 12355 | 76 aa hypothetical protein | |||
| 12815 | HNH endonuclease | |||
| 12820 | M | M.Pdi11157ORF540P (28% identity) | GAWTC | M.Pme0054II |
| 12825 | TdeIII family type II restriction endonuclease | |||
| 13405 | sensor histidine kinase | |||
| 13410 | M | M.Pin2069ORF11450P (82% identity) | M.Pme0054ORF13410P | |
| 13415 | outer membrane beta-barrel protein | |||