Prevotella nigrescens F0103 |
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Putative Prevotella nigrescens F0103 RM systems
Ref: Johnston,C.D. et al. unpublished
REBASE ref # 31062
| Sequence length: | GenBank #: | |
| chromosome 1: | 2,251,857 bp | CP072341 |
| chromosome 2: | 653,711 bp | CP072342 |
REBASE acronym: Pni103
Org_num: 48664
All begin J4865_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 11155 | IS982 family transposase | |||
| 11160 | M | M.Pin2836ORF11290P (93% identity) | M.Pni103ORF11160P | |
| 11165 | 168 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 3395 | DNA repair protein RecO | |||
| 3400 | R | Pin2734IVP (97% identity) | Pni103ORF3405P | |
| 3405 | M | M.Pin2734IV (96% identity) | M.Pni103ORF3405P | |
| 3410 | NigD-like N-terminal domain-containing protein | |||
| 4770 | radical SAM protein | |||
| 4775 | M | M.Pni9336I (98% identity) | GATC | M.Pni103ORF4775P |
| 4780 | R | Pni9336IP (98% identity) | GATC | Pni103ORF4775P |
| 4785 | 293 aa hypothetical protein | |||
| 9805 | HNH endonuclease | |||
| 9810 | M | M.Pmu96ORF7695P (99% identity) | M.Pni103ORF9810P | |
| 9815 | IS4 family transposase | |||
| 10330 | 710 aa hypothetical protein | |||
| 10335 | M | M.Pni103ORF10335P (99% identity) | M1.Pni103ORF10335P | |
| 10340 | M | M1.EfaWf282ORFEP (49% identity) | M2.Pni103ORF10335P | |
| 10345 | 49 aa hypothetical protein | |||
| chromosome 2 | ||||
| 11310 | 236 aa hypothetical protein | |||
| ??? | M | M.Pme1567ORF9925P (61% identity) | M.Pni103ORF11315P | |
| 11325 | 127 aa hypothetical protein | |||
| 11330 | 538 aa hypothetical protein | |||
| 11335 | DUF2357 domain-containing protein | |||
| 11340 | V | V.Pmu20ORFCP (41% identity) | V.Pni103ORF11315P | |
| 11345 | HIRAN domain-containing protein | |||
| 13155 | 61 aa hypothetical protein | |||
| 13160 | RM | Beg1248ORFAP (91% identity) | Pni103ORF13160P | |
| 13165 | DNA/RNA non-specific endonuclease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 12795 | glycosyltransferase | |||
| 12800 | R | Pin1101McrCP (98% identity) | Pni103McrCP | |
| 12805 | R | Pin2834McrBP (94% identity) | Pni103McrBP | |
| 12810 | SRPBCC family protein | |||