Prevotella nigrescens F0630 |
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Putative Prevotella nigrescens F0630 RM systems
Ref: Johnston,C.D. et al. unpublished
REBASE ref # 31062
| Sequence length: | GenBank #: | |
| chromosome 1: | 2,204,083 bp | CP072335 |
| chromosome 2: | 724,124 bp | CP072336 |
REBASE acronym: Pni630
Org_num: 48666
All begin J5A70_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1205 | 76 aa hypothetical protein | |||
| 1210 | S | S4.Pin2833ORF7120P (100% identity) | S4.Pni630IIP | |
| 1215 | tyrosine-type recombinase/integrase | |||
| 1220 | S | S3.PdeF0115ORF540P (93% identity) | S3.Pni630IIP | |
| 1225 | S | S2.Pin2833ORF7120P (71% identity) | CYAANNNNNNNNTAG | S2.Pni630II |
| 1230 | DUF1016 family protein | |||
| 1235 | M | M.Pin2833ORF7120P (100% identity) | CYAANNNNNNNNTAG | M.Pni630II |
| 1240 | R | Pin2833ORF7120P (100% identity) | CYAANNNNNNNNTAG | Pni630IIP |
| 1245 | DUF262 domain-containing protein | |||
| chromosome 2 | ||||
| 9500 | IS982 family transposase | |||
| 9505 | M | M.Tfo3313ORF1228P (92% identity) | M.Pni630ORF9505P | |
| 9510 | 278 aa hypothetical protein | |||
| 9515 | S | S.FspYJ01ORF6205P (37% identity) | S1.Pni630ORF9505P | |
| 9520 | S | S.Pin2836ORF11290P (42% identity) | S2.Pni630ORF9505P | |
| 9525 | AAA family ATPase | |||
| 9530 | R | Pgi49417ORF7780P (94% identity) | Pni630ORF9505P | |
| 9535 | virulence RhuM family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 990 | choice-of-anchor J domain-containing protein | |||
| 995 | M | M.Pin2734IV (90% identity) | GTYRAC | M.Pni630IV |
| 1000 | R | Pin2734IVP (88% identity) | GTYRAC | Pni630IVP |
| 1005 | 532 aa hypothetical protein | |||
| 1740 | leucine-rich repeat domain-containing protein | |||
| 1745 | R | Pni109IIIP (94% identity) | GTSAC | Pni630IIIP |
| 1750 | M | M.Pni109III (97% identity) | GTSAC | M.Pni630III |
| 1755 | undecaprenyldiphospho-muramoylpentapeptide | |||
| 3190 | radical SAM protein | |||
| 3195 | M | M.Pni103ORF4775P (95% identity) | GATC | M.Pni630I |
| 3200 | 293 aa hypothetical protein | |||
| chromosome 2 | ||||
| 10885 | helix-turn-helix transcriptional regulator | |||
| 10890 | M | M.Pin1779ORF7860P (99% identity) | M.Pni630ORF10890P | |
| 10895 | ATP-binding protein | |||
| 10900 | 511 aa hypothetical protein | |||
| 10905 | V | V.Pin1779ORF7860P (100% identity) | V.Pni630ORF10890P | |
| 10910 | 84 aa hypothetical protein | |||
| 11805 | R | Pni109IVP (97% identity) | GGATG | Pni630VP |
| 11810 | M | M2.Pni109IV (98% identity) | GGATG | M2.Pni630V |
| 11815 | M | M1.Pni109IV (99% identity) | GGATG | M1.Pni630V |
| 11820 | 279 aa hypothetical protein | |||