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Putative Thiothrix species A52 RM systems
Ref: Ravin,N.V. et al. unpublished
REBASE ref # 32481
Complete sequence: 3,546,315 bp
GenBank #: CP072800
REBASE acronym: TspA52
Org_num: 49560
All begin J8380_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
3770 | hydrogenase expression/formation protein HypE | |||
3775 | M | M.TmoRTORF13830P (91% identity) | M.TspA52ORF3775P | |
3780 | BrnT family toxin | |||
4455 | Fertility inhibition FinO | |||
4460 | M | M.TspQ5ORF8475P (91% identity) | M.TspA52ORF4460P | |
4465 | S | S.Jsp10ORF12350P (41% identity) | S.TspA52ORF4460P | |
4470 | DNA-binding protein | |||
4475 | type II toxin-antitoxin system death-on-curing | |||
4480 | R | Tla21227ORFLP (96% identity) | TspA52ORF4460P | |
4485 | 111 aa hypothetical protein | |||
4955 | 102 aa hypothetical protein | |||
4960 | M | M.TspCT3ORF20305P (96% identity) | M.TspA52ORF4960P | |
4965 | S | S2.TlaWSORF15330P (66% identity) | S.TspA52ORF4960P | |
4970 | virulence RhuM family protein | |||
4975 | R | TlaWSORF15330P (87% identity) | TspA52ORF4960P | |
4980 | ATP-binding protein | |||
5150 | DUF1016 family protein | |||
5155 | R | Msp268IIP (63% identity) | TspA52ORF5165P | |
5160 | S | S.RdeMT042ORF10115P (43% identity) | S.TspA52ORF5165P | |
5165 | M | M.TspQ5ORF11140P (69% identity) | M.TspA52ORF5165P | |
5170 | sterol desaturase family protein | |||
7060 | ABC transporter permease | |||
7065 | M | M.AolDQS4ORF4P (76% identity) | M.TspA52ORF7065P | |
7070 | S | S1.Sma141ORF5360P (34% identity) | S.TspA52ORF7065P | |
7075 | 158 aa hypothetical protein | |||
7080 | adenosine monophosphate-protein | |||
7085 | DNA binding domain-containing protein | |||
7090 | DUF4433 domain-containing protein | |||
7095 | macro domain-containing protein | |||
7100 | R | WocXK5ORF6040P (75% identity) | TspA52ORF7065P | |
7105 | M48 family metallopeptidase | |||
13775 | DUF937 domain-containing protein | |||
13785 | S | S2.TspASORF7130P (44% identity) | S.TspA52ORF13790P | |
13790 | M | M.MspRZ01ORFDP (72% identity) | M.TspA52ORF13790P | |
??? | R | Psp126ORF3829P (66% identity) | TspA52ORF13790P | |
13800 | transglutaminase family protein | |||
14855 | alanine--glyoxylate aminotransferase family | |||
14860 | M | M.TspCT3ORF12670P (98% identity) | M.TspA52ORF14860P | |
14865 | S | S.TsuDNT52ORF17140P (56% identity) | S.TspA52ORF14860P | |
14870 | DUF3368 domain-containing protein | |||
14875 | UPF0175 family protein | |||
14880 | R | TsuDNT52ORF17140P (87% identity) | TspA52ORF14860P | |
14885 | AarF/ABC1/UbiB kinase family protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1940 | 69 aa hypothetical protein | |||
1945 | R | Tla21227ORFCP (89% identity) | TspA52ORF1945P | |
1950 | HIT family protein | |||
2360 | AIPR family protein | |||
2365 | R | TlaMK1ORF9770P (89% identity) | TspA52ORF2370P | |
2370 | M | M.TlaMK1ORF9770P (94% identity) | M.TspA52ORF2370P | |
2375 | quinolinate synthase NadA | |||
4120 | DUF3362 domain-containing protein | |||
4125 | R | TspQ5ORF8375P (98% identity) | TspA52ORF4130P | |
4130 | M | M.TspQ5ORF8375P (98% identity) | M.TspA52ORF4130P | |
4135 | MarR family transcriptional regulator | |||
4555 | YaeQ family protein | |||
4560 | M | M.TspQ5ORF9800P (99% identity) | M.TspA52ORF4560P | |
4565 | R | TspCT3ORF4155P (96% identity) | TspA52ORF4560P | |
4570 | dimethyl sulfoxide reductase anchor subunit | |||
6010 | ribonucleoside-diphosphate reductase subunit | |||
6015 | M | M.Tca21228ORF438P (76% identity) | M.TspA52ORF6015P | |
6020 | R | TspASORF14925P (92% identity) | TspA52ORF6015P | |
6025 | ribonucleotide-diphosphate reductase subunit | |||
6315 | DMT family transporter | |||
6320 | RM | Tni5205ORFPP (74% identity) | TspA52ORF6320P | |
6325 | 371 aa hypothetical protein | |||
10840 | plasmid pRiA4b ORF-3 family protein | |||
10845 | RM | PspZN5ORF19185P (42% identity) | TspA52ORF10845AP | |
10850 | RM | Hba3088ORF4230P (19% identity) | TspA52ORF10845BP | |
10855 | endonuclease domain-containing protein | |||
12830 | BREX system P-loop protein BrxC | |||
12835 | RM | Esp8EORF3670P (46% identity) | TspA52ORF12835P | |
12840 | AAA family ATPase | |||
15855 | DUF1566 domain-containing protein | |||
15860 | M | M.Tca21228ORF1834P (92% identity) | M.TspA52ORF15860P | |
15865 | R | Tca21228ORF1834P (98% identity) | TspA52ORF15860P | |
15870 | helix-turn-helix transcriptional regulator | |||
16670 | FAD-dependent oxidoreductase | |||
16675 | M | M.Csp4105ORF54870P (54% identity) | M.TspA52ORF16675P | |
16680 | 365 aa hypothetical protein | |||
16970 | nicotinamide-nucleotide amidohydrolase family | |||
16975 | M | M.Aba17537ORF895P (70% identity) | M.TspA52ORF16975P | |
16980 | S49 family peptidase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
10465 | type II toxin-antitoxin system VapB family | |||
10470 | M | M.MisDPrORF15410P (42% identity) | M.TspA52ORF10470P | |
10475 | R | PgoG1ORFCP (45% identity) | TspA52ORF10470P | |
10480 | 62 aa hypothetical protein | |||
11900 | NERD domain-containing protein | |||
11905 | M | M.TspCT3ORF4680P (69% identity) | M.TspA52ORF11905P | |
11910 | AAA family ATPase | |||
15240 | hydantoinase B/oxoprolinase family protein | |||
15245 | R | TspQ5ORF12655P (80% identity) | TspA52ORF15260P | |
15250 | DUF4276 family protein | |||
15255 | AAA family ATPase | |||
15260 | M | M.TspQ5ORF12655P (61% identity) | M.TspA52ORF15260P | |
15265 | 310 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
10995 | GlsB/YeaQ/YmgE family stress response membrane | |||
11000 | R | TspCT3MrrP (99% identity) | TspA52MrrP | |
11005 | helix-turn-helix domain-containing protein |