Bifidobacterium bifidum CNCM I-4319 |
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Putative Bifidobacterium bifidum CNCM I-4319 RM systems
Ref: Martin,R. et al. Microorganisms 8 (9), E1313 (2020)
REBASE ref # 31781
Complete sequence: 2,193,720 bp
GenBank #: CP058603
REBASE acronym: Bbi4319
Org_num: 46431
All begin CNCMI4319_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 146 | 481 aa hypothetical protein | |||
| 147 | M | M.Blo10116I (99% identity) | CAAYNNNNNGTAY | M.Bbi4319ORF147P |
| 148 | 318 aa hypothetical protein | |||
| 149 | S | S.Blo10116I (100% identity) | CAAYNNNNNGTAY | S.Bbi4319ORF147P |
| 150 | Abi family protein | |||
| 151 | R | Blo10116IP (99% identity) | CAAYNNNNNGTAY | Bbi4319ORF147P |
| 152 | mobilization protein | |||
| 1111 | argininosuccinate lyase ArgH | |||
| 1112 | R | Bbi10347ORF1304P (99% identity) | Bbi4319ORF1115P | |
| 1113 | transcriptional regulator | |||
| 1114 | S | S1.BloBXY01ORF7845P (57% identity) | S.Bbi4319ORF1115P | |
| 1115 | M | M.Bbi29521ORF616P (99% identity) | M.Bbi4319ORF1115P | |
| 1116 | 280 aa hypothetical protein | |||
| 1326 | 71 aa hypothetical protein | |||
| ??? | S | S6.Bbi13001IIIP (100% identity) | S4.Bbi4319ORF1329P | |
| ??? | S | S3.Blo5934ORF6945P (93% identity) | S3.Bbi4319ORF1329P | |
| 1328 | S | S2.Bka15439ORF782P (99% identity) | S2.Bbi4319ORF1329P | |
| ??? | S | S1.BloBPORF2330P (100% identity) | S1.Bbi4319ORF1329P | |
| 1329 | M | M.BloZJ1ORFCP (99% identity) | M.Bbi4319ORF1329P | |
| 1330 | R | Bbi13001IIIP (98% identity) | Bbi4319ORF1329P | |
| 1331 | isoleucyl-trna synthetase IleS | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 512 | 16S RNA methylase | |||
| 513 | R | BbiS6ORF8015P (99% identity) | C | Bbi4319ORF513P |
| 514 | GTP-binding protein HflX | |||
| 897 | 392 aa hypothetical protein | |||
| 898 | RM | BpsD2ORF11730CP (97% identity) | Bbi4319ORF901P | |
| 899 | M | Bbi7004ORF2877BP (46% identity) | M2.Bbi4319ORF901P | |
| 900 | site-specific DNA-methyltransferase | |||
| 901 | M | M2.Bbi2010ORF859P (89% identity) | M1.Bbi4319ORF901P | |
| 902 | 822 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 104 | 166 aa hypothetical protein | |||
| 105 | R | Bfi002ORF4175P (99% identity) | Bbi4319ORF105P | |
| 106 | MutT/nudix family protein | |||