Klebsiella grimontii 5512.56 |
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Putative Klebsiella grimontii 5512.56 RM systems
Ref: Campos-Madueno,E.I. and Endimiani,A. unpublished
REBASE ref # 31925
| Sequence length: | GenBank #: | |
| Chromosome: | 5,760,305 bp | CP067391 |
| plasmid p5512.56-1: | 232,127 bp | CP067390 |
| plasmid p5512.56-2-CTXM14: | 92,905 bp | CP067389 |
| plasmid p5512.56-3-VIM1: | 90,605 bp | CP067384 |
REBASE acronym: Kgr56
Org_num: 47856
All begin JJJ11_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7865 | 197 aa hypothetical protein | |||
| 7870 | R | Eho220ORF4715P (100% identity) | Kgr56ORF7880P | |
| 7875 | S | S.Eho220ORF4715P (100% identity) | S.Kgr56ORF7880P | |
| ??? | M | M.Eho220ORF4715P (98% identity) | M.Kgr56ORF7880P | |
| 7885 | transposase | |||
| plasmid p5512.56-1 | ||||
| 1600 | glycogen/starch/alpha-glucan family | |||
| 1605 | M | M.Rel102253ORF5536P (100% identity) | GACNNNNNNGTC | M.Kgr56ORF1605P |
| 1610 | S | S.Rel102253ORF5536P (100% identity) | GACNNNNNNGTC | S.Kgr56ORF1605P |
| 1615 | R | Rel102253ORF5536P (100% identity) | GACNNNNNNGTC | Kgr56ORF1605P |
| 1620 | ISL3 family transposase | |||
| 1920 | M48 family metallopeptidase | |||
| 1925 | R | SmaQC11ORF51970P (100% identity) | GATGNNNNNNTGC | Kgr56ORF1940P |
| 1930 | YecA family protein | |||
| 1935 | S | S.Kqu1124ORF26120P (95% identity) | GATGNNNNNNTGC | S.Kgr56ORF1940P |
| 1940 | M | M.SmaQC11ORF51970P (100% identity) | GATGNNNNNNTGC | M.Kgr56ORF1940P |
| 1945 | IS1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4215 | cell division protein DamX | |||
| 4220 | M | M.PmeBin334DamP (100% identity) | GATC | M.Kgr56DamP |
| 4225 | ribulose-phosphate 3-epimerase | |||
| 12035 | phosphohydrolase | |||
| 12040 | M | M.KspMPUS7DcmP (100% identity) | M.Kgr56DcmP | |
| 12045 | V | V.PmeBin334DcmP (100% identity) | V.Kgr56DcmP | |
| 12050 | drug/metabolite exporter YedA | |||
| 12740 | dcm methylase | |||
| 12745 | M | M1.Kox6895ORF27270P (97% identity) | M.Kgr56ORF12745P | |
| 12750 | regulator | |||
| 18585 | 64 aa hypothetical protein | |||
| 18590 | M | M.Kox326ORF3180P (98% identity) | M.Kgr56ORF18590P | |
| 18595 | 3-5 exoribonuclease | |||
| plasmid p5512.56-1 | ||||
| 1855 | 297 aa hypothetical protein | |||
| 1860 | M | M.SmaKC004ORF48960P (93% identity) | M.Kgr56ORF1860P | |
| 1865 | incFII family plasmid replication initiator | |||
| 2305 | tyrosine-type recombinase/integrase | |||
| 2310 | R | Kgr56ORF1145P (100% identity) | CCWGG | Kgr56ORF2315P |
| 2315 | M | M.KpnF979ORF25760P (100% identity) | CCWGG | M.Kgr56ORF2315P |
| 2320 | AAA family ATPase | |||
| plasmid p5512.56-2-CTXM14 | ||||
| 820 | 73 aa hypothetical protein | |||
| 825 | M | M.KpnP72ORF28970P (100% identity) | M.Kgr56ORF825P | |
| 830 | 66 aa hypothetical protein | |||
| 1095 | 73 aa hypothetical protein | |||
| 1100 | M | M.SmaQC11ORF52800P (100% identity) | M.Kgr56ORF1100P | |
| 1105 | 76 aa hypothetical protein | |||
| 1135 | tyrosine-type recombinase/integrase | |||
| 1140 | R | Kgr56ORF2315P (100% identity) | CCWGG | Kgr56ORF1145P |
| 1145 | M | M.KpnF979ORF25760P (100% identity) | CCWGG | M.Kgr56ORF1145P |
| 1150 | AAA family ATPase | |||
| plasmid p5512.56-3-VIM1 | ||||
| 240 | 111 aa hypothetical protein | |||
| 245 | M | M.Ero52266ORF10740P (100% identity) | M.Kgr56ORF245P | |
| 250 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11875 | shufflon system plasmid conjugative transfer | |||
| 11880 | R | SspHRORF22130P (98% identity) | GGCACC | Kgr56ORF11885P |
| 11885 | M | M.SspHRORF22130P (100% identity) | GGCACC | M.Kgr56ORF11885P |
| 11890 | SpnT protein | |||
| plasmid p5512.56-2-CTXM14 | ||||
| 965 | conjugative transfer relaxase/helicase TraI | |||
| 970 | R | RorVR1ORF60280P (47% identity) | Kgr56ORF975P | |
| 975 | M | M.RorVR1ORF60280P (99% identity) | M.Kgr56ORF975P | |
| 980 | DEAD/DEAH box helicase | |||