Escherichia coli SCU-101 |
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Putative Escherichia coli SCU-101 RM systems
Ref: Stephens,C. et al. mSphere 5 (4), e00709-20 (2020)
REBASE ref # 31859
Complete sequence: 5,357,129 bp
GenBank #: CP051849
REBASE acronym: EcoSCU101
Org_num: 40055
All begin HHJ20_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22140 | DUF262 domain-containing protein | |||
| 22145 | R | EcoUTI89IIP (100% identity) | GAGNNNNNNNGTCA | EcoSCU101ORF22110P |
| 22150 | M | M.EcoUTI89II (100% identity) | GAGNNNNNNNGTCA | M.EcoSCU101ORF22110P |
| 22155 | S | S.EcoUTI89II (100% identity) | GAGNNNNNNNGTCA | S.EcoSCU101ORF22110P |
| 22160 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2085 | cell division protein DamX | |||
| 2090 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoSCU101DamP |
| 2095 | ribulose-phosphate 3-epimerase | |||
| 2685 | DUF2556 family protein | |||
| 2690 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoSCU101ORF2685P |
| 2695 | DNA-binding transcriptional regulator Fis | |||
| 7560 | DUF1382 family protein | |||
| 7565 | M | M.EcosC25ORF8435P (100% identity) | M.EcoSCU101ORF7565P | |
| 7570 | PerC family transcriptional regulator | |||
| 11025 | phosphohydrolase | |||
| 11030 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoSCU101DcmP |
| 11035 | V | V.EcosC25DcmP (100% identity) | V.EcoSCU101DcmP | |
| 11040 | drug/metabolite exporter YedA | |||
| 20430 | helix-turn-helix domain-containing protein | |||
| 20435 | M | M.KaeCRE8ORF15605P (100% identity) | M.EcoSCU101ORF20405P | |
| 20440 | 71 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22370 | ATP-binding domain-containing protein | |||
| 22375 | M | M.EcoUTI89I (100% identity) | CACAG | M.EcoSCU101ORF22335P |
| 22380 | R | EcoUTI89IP (100% identity) | CACAG | EcoSCU101ORF22335P |
| 22385 | integrase arm-type DNA-binding domain-containing | |||