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Putative Xenorhabdus budapestensis C-7-2 RM systems
Ref: LI,B. et al. unpublished
REBASE ref # 32521
Complete sequence: 4,366,413 bp
GenBank #: CP072455
REBASE acronym: XbuC72
Org_num: 49857
All begin HGO23_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
2555 | nucleotidyl transferase AbiEii/AbiGii toxin | |||
2560 | M | M.XneXORFGP (99% identity) | M.XbuC72ORF2560P | |
2565 | S | S2.Xsp857ORF17370P (50% identity) | S.XbuC72ORF2560P | |
2570 | R | XneXORFGP (98% identity) | XbuC72ORF2560P | |
2575 | integrase domain-containing protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
330 | ribulose-phosphate 3-epimerase | |||
335 | M | M.XnePDamP (90% identity) | M.XbuC72DamP | |
340 | SPOR domain-containing protein | |||
3975 | 100 aa hypothetical protein | |||
3980 | M | M.AspaPbORF4335P (64% identity) | M.XbuC72ORF3980P | |
3985 | 143 aa hypothetical protein | |||
4100 | 66 aa hypothetical protein | |||
4105 | M | M.Xsp857ORF2595P (90% identity) | M.XbuC72ORF4105P | |
4110 | 46 aa hypothetical protein | |||
4355 | 66 aa hypothetical protein | |||
4360 | M | M.Xgr1ORF15690P (96% identity) | M.XbuC72ORF4360P | |
4365 | DUF2829 domain-containing protein | |||
5205 | IS1182 family transposase | |||
5210 | RM | PcyNE1ORF2705P (87% identity) | XbuC72ORF5210P | |
5215 | ATP-dependent helicase | |||
11375 | 66 aa hypothetical protein | |||
11380 | M | M.XnePORF3088P (83% identity) | M.XbuC72ORF11380P | |
11385 | replication endonuclease | |||
11385 | replication endonuclease | |||
11390 | M | M.Xgr1ORF14295P (81% identity) | M.XbuC72ORF11390P | |
11395 | 135 aa hypothetical protein | |||
12735 | 58 aa hypothetical protein | |||
12740 | M | M.XspTCT1ORF22650P (83% identity) | M.XbuC72ORF12740P | |
12745 | 75 aa hypothetical protein | |||
17170 | AbrB/MazE/SpoVT family DNA-binding | |||
17175 | R | Xdo16ORF691P (87% identity) | XbuC72ORF17175P | |
17180 | spermidine/putrescine ABC transporter | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
110 | 184 aa hypothetical protein | |||
115 | R | XhoANU1ORF15300P (93% identity) | XbuC72ORF120P | |
120 | M | M.XhoANU1ORF15300P (92% identity) | M1.XbuC72ORF120P | |
125 | M | M.Xgr1ORF18860P (91% identity) | M2.XbuC72ORF120P | |
130 | transposase | |||
6205 | phage holin, lambda family | |||
6210 | M | M.XbuC72ORF12920P (87% identity) | M.XbuC72ORF6210P | |
6220 | antitermination protein | |||
12915 | DNA adenine methylase | |||
12920 | M | M.XbuC72ORF6210P (87% identity) | M.XbuC72ORF12920P | |
12925 | phage holin, lambda family |