Vibrio species B1FLJ16 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Vibrio species B1FLJ16 RM systems
Ref: Gautier,M. and Culot,A. unpublished
REBASE ref # 32506
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,271,709 bp | HG992758 |
| chromosome 1: | 3,079,773 bp | HG992749 |
REBASE acronym: VspJ16A
Org_num: 49812
All begin ACOMICROBIO_EPCKBFOG_, ACOMICROBIO_FLGHMIGD_, ACOMICROBIO_LOCUS
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 273 | AAA ATPase domain | |||
| 274 | S | S.VspJ16ORF281P (100% identity) | S.VspJ16AORF275P | |
| 275 | M | M.VspJ16ORF281P (100% identity) | M.VspJ16AORF275P | |
| 379 | 441 aa hypothetical protein | |||
| 380 | 428 aa hypothetical protein | |||
| 276 | R | VspJ16ORF281P (100% identity) | VspJ16AORF275P | |
| 382 | 385 aa hypothetical protein | |||
| 879 | 409 aa hypothetical protein | |||
| 632 | M | M.ValFA2ORF50P (98% identity) | M.VspJ16AORF632P | |
| 633 | S | S.Vpa19500ORFAP (44% identity) | S1.VspJ16AORF632P | |
| 634 | S | S.VcaC012ORF3920P (27% identity) | S2.VspJ16AORF632P | |
| 883 | 411 aa hypothetical protein | |||
| 635 | R | ValFA2ORF50P (89% identity) | VspJ16AORF632P | |
| 885 | 258 aa hypothetical protein | |||
| 1320 | restriction endonuclease | |||
| 1321 | R | Val1833aORFAP (99% identity) | VspJ16AORF1323P | |
| 1322 | S | S.VpaCHN25ORF2353P (100% identity) | S.VspJ16AORF1323P | |
| 1323 | M | M.VpaCHN25ORF2353P (99% identity) | M.VspJ16AORF1323P | |
| 1324 | WYL domain | |||
| chromosome 1 | ||||
| 279 | AAA ATPase domain | |||
| 280 | S | S.VspJ16AORF275P (100% identity) | S.VspJ16ORF281P | |
| 281 | M | M.VspJ16AORF275P (100% identity) | M.VspJ16ORF281P | |
| 373 | 441 aa hypothetical protein | |||
| 374 | 428 aa hypothetical protein | |||
| 282 | R | VspJ16AORF275P (100% identity) | VspJ16ORF281P | |
| 376 | 266 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1899 | Belongs to the ribulose-phosphate 3-epimerase | |||
| 1900 | M | M.VspJ16DamP (99% identity) | GATC | M.VspJ16ADamP |
| 1901 | AAA domain | |||
| chromosome 1 | ||||
| 1268 | methyltransferase | |||
| 1269 | M | M.Ple12DndBP (94% identity) | M.VspJ16DndBP | |
| ??? | phosphoadenosine phosphosulfate reductase family protein | |||
| 1269 | DNA-sulfur modification-associated | |||
| ??? | M | M.Ple12DndCP (84% identity) | M.VspJ16DndCP | |
| 1271 | modification protein DndD | |||
| ??? | phosphoadenosine phosphosulfate reductase family protein | |||
| 1271 | M | M.Toc189DndDP (89% identity) | M.VspJ16DndDP | |
| 1762 | 116 aa hypothetical protein | |||
| 1271 | modification protein DndD | |||
| 1762 | M | M.Pdaa311DndEP (83% identity) | M.VspJ16DndEP | |
| 1763 | 181 aa hypothetical protein | |||
| 1770 | 111 aa hypothetical protein | |||
| 1275 | R | Van237DptHP (91% identity) | VspJ16DptHP | |
| ??? | DNA phosphorothioation-dependent restriction protein DptG | |||
| 1275 | DNA helicase | |||
| ??? | R | Vsp002DptGP (91% identity) | VspJ16DptGP | |
| 1774 | 531 aa hypothetical protein | |||
| ??? | DNA phosphorothioation-dependent restriction protein DptG | |||
| 1774 | R | Toc189DptFP (89% identity) | VspJ16DptFP | |
| 1276 | User locus_tag | |||
| 1813 | Belongs to the ribulose-phosphate 3-epimerase | |||
| 1814 | M | M.VspJ16ADamP (99% identity) | GATC | M.VspJ16DamP |
| 1815 | AAA domain | |||