Campylobacter jejuni GB60 |
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Putative Campylobacter jejuni GB60 RM systems
Ref: Heikema,A.P. et al. unpublished
REBASE ref # 31907
Complete sequence: 1,625,711 bp
GenBank #: CP071583
REBASE acronym: CjeGB60
Org_num: 47052
All begin J3Q13_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3590 | molecular chaperone DnaK | |||
| 3595 | M | M.CjeR73ORF3605P (100% identity) | AGTNNNNNNRTTG | M.CjeGB60ORF3595P |
| 3600 | S | S.Csp93260ORF3690P (100% identity) | AGTNNNNNNRTTG | S.CjeGB60ORF3595P |
| 3605 | DUF4145 domain-containing protein | |||
| 3610 | DUF4917 family protein | |||
| 3615 | R | Csp93260ORF3690P (100% identity) | AGTNNNNNNRTTG | CjeGB60ORF3595P |
| 3620 | MBL fold metallo-hydrolase | |||
| 7350 | NAD(P)-dependent alcohol dehydrogenase | |||
| 7355 | R | CjeR73ORF7390P (100% identity) | CRTANNNNNNNNTAYC | CjeGB60ORF7375P |
| 7360 | DUF262 domain-containing protein | |||
| 7365 | S | S.CjeR73ORF7390P (100% identity) | CRTANNNNNNNNTAYC | S.CjeGB60ORF7375P |
| 7370 | Fic family protein | |||
| 7375 | M | M.CjeR73ORF7390P (100% identity) | CRTANNNNNNNNTAYC | M.CjeGB60ORF7375P |
| 7380 | carboxymuconolactone decarboxylase family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 195 | gamma-glutamyltransferase | |||
| 200 | RM | CjeR73ORF200P (100% identity) | CjeGB60ORF200P | |
| 205 | pentapeptide repeat-containing protein | |||
| 1020 | translation initiation factor IF-3 | |||
| 1025 | M | M.CjeR73ORF1025P (100% identity) | RAATTY | M.CjeGB60ORF1025P |
| 1030 | autotransporter outer membrane beta-barrel | |||
| 3430 | M48 family metallopeptidase | |||
| 3435 | M | M.CjeR73ORF3440P (100% identity) | M.CjeGB60ORF3435P | |
| 3440 | 57 aa hypothetical protein | |||
| 8265 | Gfo/Idh/MocA family oxidoreductase | |||
| 8270 | M | M1.CjeR73ORF8285P (100% identity) | CATG | M1.CjeGB60ORF8270P |
| 8275 | DUF1016 family protein | |||
| 8280 | 73 aa hypothetical protein | |||
| 8285 | R | CjeR73ORF8285P (100% identity) | CjeGB60ORF8270P | |
| 8290 | 47 aa hypothetical protein | |||
| 8295 | M | M2.CjeR73ORF8285P (100% identity) | M2.CjeGB60ORF8270P | |
| 8300 | NADPH-dependent 7-cyano-7-deazaguanine reductase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 705 | ribosome maturation factor RimP | |||
| 710 | R | Csp93238McrBP (100% identity) | CjeGB60McrBP | |
| 715 | R | CjeR73McrCP (100% identity) | CjeGB60McrCP | |
| 720 | metal ABC transporter permease | |||