Campylobacter jejuni R23 |
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Putative Campylobacter jejuni R23 RM systems
Ref: Heikema,A.P. et al. unpublished
REBASE ref # 31907
Complete sequence: 1,627,008 bp
GenBank #: CP071580
REBASE acronym: CjeR23
Org_num: 47054
All begin J3Q18_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3600 | molecular chaperone DnaK | |||
| 3605 | M | M.CjeR73ORF3605P (100% identity) | AGTNNNNNNRTTG | M.CjeR23ORF3605P |
| 3610 | S | S.Csp93260ORF3690P (100% identity) | AGTNNNNNNRTTG | S.CjeR23ORF3605P |
| 3615 | DUF4145 domain-containing protein | |||
| 3620 | DUF4917 family protein | |||
| 3625 | R | Csp93260ORF3690P (100% identity) | AGTNNNNNNRTTG | CjeR23ORF3605P |
| 3630 | MBL fold metallo-hydrolase | |||
| 7375 | NAD(P)-dependent alcohol dehydrogenase | |||
| 7380 | R | CjeR73ORF7390P (100% identity) | CRTANNNNNNNNTAYC | CjeR23ORF7400P |
| 7385 | DUF262 domain-containing protein | |||
| 7390 | S | S.CjeR73ORF7390P (100% identity) | CRTANNNNNNNNTAYC | S.CjeR23ORF7400P |
| 7395 | Fic family protein | |||
| 7400 | M | M.CjeR73ORF7390P (100% identity) | CRTANNNNNNNNTAYC | M.CjeR23ORF7400P |
| 7405 | carboxymuconolactone decarboxylase family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 195 | gamma-glutamyltransferase | |||
| 200 | RM | CjeR73ORF200P (100% identity) | CjeR23ORF200P | |
| 205 | pentapeptide repeat-containing protein | |||
| 1020 | translation initiation factor IF-3 | |||
| 1025 | M | M.CjeR73ORF1025P (100% identity) | RAATTY | M.CjeR23ORF1025P |
| 1030 | autotransporter outer membrane beta-barrel | |||
| 3435 | M48 family metallopeptidase | |||
| 3440 | M | M.CjeR73ORF3440P (100% identity) | M.CjeR23ORF3440P | |
| 3445 | 57 aa hypothetical protein | |||
| 8290 | Gfo/Idh/MocA family oxidoreductase | |||
| 8295 | M | M1.CjeR73ORF8285P (100% identity) | CATG | M1.CjeR23ORF8295P |
| 8300 | DUF1016 family protein | |||
| 8305 | 73 aa hypothetical protein | |||
| 8310 | R | CjeR73ORF8285P (100% identity) | CjeR23ORF8295P | |
| 8315 | 47 aa hypothetical protein | |||
| 8320 | M | M2.CjeR73ORF8285P (100% identity) | M2.CjeR23ORF8295P | |
| 8325 | NADPH-dependent 7-cyano-7-deazaguanine reductase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 705 | ribosome maturation factor RimP | |||
| 710 | R | Csp93238McrBP (100% identity) | CjeR23McrBP | |
| 715 | R | CjeR73McrCP (100% identity) | CjeR23McrCP | |
| 720 | metal ABC transporter permease | |||