Hahella chejuensis KCTC 2396 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Hahella chejuensis KCTC 2396 RM systems
Ref: Jeong,H. et al. (er) Nucleic Acids Res. 33 (22), 7066-7073 (2005)
REBASE ref # 9213
Complete sequence: 7,215,267 bp
GenBank #: CP000155 (NC_007645)
REBASE acronym: Hch
Org_num: 4232
All begin HCH_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5025 | predicted hydrolase (metallo-beta-lactamase | |||
| 5026 | R | HchAFORFFP (100% identity) | GAANNNNNNTCGG | HchIP |
| 5028 | S | S.HchAFORFFP (98% identity) | GAANNNNNNTCGG | S.HchI |
| 5029 | M | M.HchAFORFFP (96% identity) | GAANNNNNNTCGG | M.HchI |
| 5030 | sigma 54-dependent transcriptional activator | |||
| 5729 | 34 aa hypothetical protein | |||
| 5730 | M | M.HchAFORFCP (100% identity) | M.HchORF5730P | |
| 5731 | predicted membrane protein/domain | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2487 | 89 aa hypothetical protein | |||
| 10009 | R | HchAFORFJP (100% identity) | GGATCC | HchORF2488P |
| ??? | C | helix-turn-helix domain-containing protein | C.HchORF2488P | |
| 2488 | M | M.HchAFORFJP (95% identity) | GGATCC | M.HchORF2488P |
| 2490 | 33 aa hypothetical protein | |||
| 2854 | 201 aa hypothetical protein | |||
| 2855 | M | M.HchAFORFIP (100% identity) | M.HchORF2855P | |
| 2858 | 253 aa hypothetical protein | |||
| 3466 | probable phage resistance protein | |||
| ??? | M | M.HchAFORFHP (100% identity) | M.HchORF3467P | |
| 3468 | 46 aa hypothetical protein | |||
| 3805 | Superfamily II DNA/RNA helicase, SNF2 family | |||
| 3806 | RM | HchAFORFGP (100% identity) | HchORF3806P | |
| 3807 | 133 aa hypothetical protein | |||
| 5681 | 225 aa hypothetical protein | |||
| 5682 | M | M.HchAFORFEP (94% identity) | M.HchORF5682P | |
| 5683 | 131 aa conserved hypothetical protein | |||
| 5717 | 514 aa hypothetical protein | |||
| 10021 | V | V.HchAFORFDP (100% identity) | V.HchORF5719P | |
| 5719 | M | M.HchAFORFDP (100% identity) | M.HchORF5719P | |
| 5720 | 85 aa hypothetical protein | |||
| 6651 | 386 aa conserved hypothetical protein | |||
| 6652 | V | V.HchAFORFBP (100% identity) | V.HchORF6653P | |
| 6653 | M | M.HchAFORFBP (100% identity) | GGCGCC | M.HchORF6653P |
| 6654 | ATP adenylyltransferase | |||
| 7041 | 43 aa hypothetical protein | |||
| 7042 | M | M.Bsp12839DndBP (80% identity) | M.HchDndBP | |
| 7043 | 3-phosphoadenosine 5-phosphosulfate | |||
| 7042 | 366 aa conserved hypothetical protein | |||
| 7043 | M | M.Bsp12839DndCP (88% identity) | M.HchDndCP | |
| 7044 | ATPase involved in DNA repair | |||
| 7043 | 3-phosphoadenosine 5-phosphosulfate | |||
| 7044 | M | M.Bsp12839DndDP (77% identity) | M.HchDndDP | |
| 7045 | 111 aa hypothetical protein | |||
| 7044 | ATPase involved in DNA repair | |||
| 7045 | M | M.Bma65DndEP (52% identity) | M.HchDndEP | |
| 7046 | 1677 aa conserved hypothetical protein | |||
| 7045 | 111 aa hypothetical protein | |||
| 7046 | R | Bsp12839DptHP (84% identity) | HchDptHP | |
| 7048 | 448 aa hypothetical protein | |||
| 7046 | 1677 aa conserved hypothetical protein | |||
| 7048 | R | Bsp12839DptGP (83% identity) | HchDptGP | |
| 7050 | 532 aa conserved hypothetical protein | |||
| 7048 | 448 aa hypothetical protein | |||
| 7050 | R | Bsp12839DptFP (63% identity) | HchDptFP | |
| 7052 | Transposase and inactivated derivatives | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2284 | uncharacterized protein conserved in bacteria | |||
| 2283 | R | HchAFMcrCP (100% identity) | HchMcrCP | |
| 2286 | R | HchAFMcrBP (100% identity) | HchMcrBP | |
| 2288 | 40 aa hypothetical protein | |||