Escherichia coli EcPNK004 |
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Putative Escherichia coli EcPNK004 RM systems
Ref: Sharon,B.M. et al. unpublished
REBASE ref # 31828
Complete sequence: 5,013,302 bp
GenBank #: CP071439
REBASE acronym: Eco004
Org_num: 46576
All begin J1F19_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3985 | drug/metabolite exporter YedA | |||
| 3990 | V | V.Fnu048DcmP (100% identity) | V.Eco004DcmP | |
| 3995 | M | M.Fnu048DcmP (100% identity) | CCWGG | M.Eco004DcmP |
| 4000 | phosphohydrolase | |||
| 7525 | phosphoadenosine phosphosulfate reductase family | |||
| 7530 | M | M.EcoS253ORF7075P (99% identity) | M.Eco004ORF7530P | |
| 7535 | TraR/DksA family transcriptional regulator | |||
| 11015 | DNA-binding transcriptional regulator Fis | |||
| ??? | M | M.EcoTHO008ORF4610P (100% identity) | ATGCAT | M.Eco004ORF11020P |
| 11025 | DUF2556 family protein | |||
| 11570 | ribulose-phosphate 3-epimerase | |||
| 11575 | M | M.Fnu048ORFTP (100% identity) | GATC | M.Eco004DamP |
| 11580 | cell division protein DamX | |||
| 16520 | 59 aa hypothetical protein | |||
| 16525 | R | Fnu048ORFUP (96% identity) | Eco004ORF16525P | |
| 16530 | HNH endonuclease | |||
| 16570 | DEAD/DEAH box helicase | |||
| 16575 | RM | Fnu048ORFEP (100% identity) | Eco004ORF16575P | |
| 18545 | integrase domain-containing protein | |||
| 18550 | M | M.Fnu048DndBP (98% identity) | M.Eco004DndBP | |
| 18555 | DNA phosphorothioation system sulfurtransferase | |||
| 18550 | DNA sulfur modification protein DndB | |||
| 18555 | M | M.Fnu048DndCP (100% identity) | M.Eco004DndCP | |
| 18560 | DNA sulfur modification protein DndD | |||
| 18555 | DNA phosphorothioation system sulfurtransferase | |||
| 18560 | M | M.Fnu048DndDP (100% identity) | M.Eco004DndDP | |
| 18565 | DNA sulfur modification protein DndE | |||
| 18560 | DNA sulfur modification protein DndD | |||
| 18565 | M | M.Fnu048DndEP (100% identity) | M.Eco004DndEP | |
| 18570 | DGQHR domain-containing protein | |||
| 18575 | 179 aa hypothetical protein | |||
| 18580 | R | Fnu048DptHP (100% identity) | Eco004DptHP | |
| 18585 | DNA phosphorothioation-dependent restriction | |||
| 18585 | DNA phosphorothioation-dependent restriction | |||
| 18590 | R | Fnu048DptFP (100% identity) | Eco004DptFP | |
| 18595 | helix-turn-helix transcriptional regulator | |||
| 18585 | R | Fnu048DptGP (100% identity) | Eco004DptGP | |
| 18590 | DNA phosphorothioation-dependent restriction | |||
| 23485 | DUF977 family protein | |||
| 23490 | M | M.EcoDEC13EORF792P (100% identity) | M.Eco004ORF23490P | |
| 23495 | ead/Ea22-like family protein | |||
| 23575 | TrmB family transcriptional regulator | |||
| 23580 | M | M.Fnu048ORFFP (100% identity) | A | M.Eco004ORF23580P |
| 23595 | DUF3927 family protein | |||