Escherichia coli RIVM_C029952 |
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Putative Escherichia coli RIVM_C029952 RM systems
Ref: Hendrickx,A.P.A. et al. unpublished
REBASE ref # 31854
Complete sequence: 5,280,943 bp
GenBank #: CP068821
REBASE acronym: Eco29952
Org_num: 46785
All begin JNN43_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 21460 | restriction endonuclease | |||
| ??? | M | M.EcoSC054ORF4200P (100% identity) | GGYANNNNNGTNG | M.Eco29952ORF21465P |
| 21470 | S | S.Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | S.Eco29952ORF21465P |
| 21475 | R | Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | Eco29952ORF21465P |
| 21480 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2060 | cell division protein DamX | |||
| 2065 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco29952DamP |
| 2070 | ribulose-phosphate 3-epimerase | |||
| 2595 | DUF2556 family protein | |||
| 2600 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.Eco29952ORF2600P |
| 2605 | DNA-binding transcriptional regulator Fis | |||
| 16730 | drug/metabolite exporter YedA | |||
| 16735 | V | V.SsoSE61DcmP (100% identity) | V.Eco29952DcmP | |
| 16740 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco29952DcmP |
| 16745 | hydrolase | |||
| 21210 | phage lysis protein EssD | |||
| 21215 | M | M.Eco28568ORF20730P (100% identity) | M.Eco29952ORF21215P | |
| 21220 | TrmB family transcriptional regulator | |||
| 21220 | TrmB family transcriptional regulator | |||
| 21225 | R | EcoS0247ORF16915AP (100% identity) | R1.Eco29952ORF21235P | |
| 21230 | R | R2.Eco28568ORF20750P (100% identity) | R2.Eco29952ORF21235P | |
| 21235 | M | M.EcoST131ORF16015P (100% identity) | M.Eco29952ORF21235P | |
| 21240 | antitermination protein | |||