Escherichia albertii Sample 165 |
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Putative Escherichia albertii Sample 165 RM systems
Ref: Wang,H. et al. unpublished
REBASE ref # 31829
| Sequence length: | GenBank #: | |
| Chromosome: | 4,801,936 bp | CP070296 |
| plasmid pESA136_1: | 266,043 bp | CP070297 |
| plasmid pESA136_3: | 82,787 bp | CP070299 |
| plasmid pESA136_4: | 97,847 bp | CP070300 |
REBASE acronym: Eal165
Org_num: 46580
All begin JRC44_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3475 | AAA family ATPase | |||
| 3480 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.Eal165ORF3485P |
| 3485 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.Eal165ORF3485P |
| 3490 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | Eal165ORF3485P |
| 3495 | transposase | |||
| 6060 | IS1 family transposase | |||
| 6065 | R | EalKF1ORF3355P (100% identity) | ACAYNNNNCTG | Eal165ORF6075P |
| 6070 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.Eal165ORF6075P |
| ??? | M | M.EcoVL02ORF7370P (100% identity) | ACAYNNNNCTG | M.Eal165ORF6075P |
| 6080 | transposase | |||
| 19820 | Fic family protein | |||
| 19825 | R | EalEA04ORF19800P (100% identity) | Eal165ORF19830P | |
| 19830 | M | M.EalLWGAORF20085P (100% identity) | M.Eal165ORF19830P | |
| ??? | S | S.EalLWGAORF20085P (100% identity) | S.Eal165ORF19830P | |
| 19840 | endoribonuclease SymE | |||
| 20075 | IS66-like element ISEc8 family transposase | |||
| 20080 | M | M.EalLWGAORF20570P (97% identity) | M.Eal165ORF20080P | |
| 20085 | McrB family protein | |||
| 20090 | McrC family protein | |||
| 20095 | IS66-like element ISEc8 family transposase | |||
| 20100 | IS66 family insertion sequence element accessory | |||
| 20105 | IS66 family insertion sequence hypothetical | |||
| 20110 | S | S.EalLWGAORF20570P (100% identity) | S.Eal165ORF20080P | |
| 20115 | R | EalLWGAORF20570P (71% identity) | Eal165ORF20080AP | |
| 20120 | IS3 family transposase | |||
| 20125 | R | EfeEF02ORF206740P (26% identity) | Eal165ORF20080BP | |
| 20130 | integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1735 | cell division protein DamX | |||
| 1740 | M | M.Eco4356DamP (100% identity) | GATC | M.Eal165DamP |
| 1745 | ribulose-phosphate 3-epimerase | |||
| 2255 | DUF2556 family protein | |||
| 2260 | M | M.Eco4356ORFEP (100% identity) | M.Eal165ORF2260P | |
| 2265 | DNA-binding transcriptional regulator Fis | |||
| 6155 | TraR/DksA family transcriptional regulator | |||
| 6160 | M | M.Sen6004ORF13105P (100% identity) | GATC | M.Eal165ORF6160P |
| 6165 | replication endonuclease | |||
| 9660 | TrmB family transcriptional regulator | |||
| 9665 | M | M.EcoS7438ORFNP (100% identity) | M.Eal165ORF9665P | |
| 9680 | DUF3927 family protein | |||
| 9785 | phosphohydrolase | |||
| 9790 | M | M.EalKF1DcmP (100% identity) | CCWGG | M.Eal165DcmP |
| 9795 | V | V.Eco4356DcmP (100% identity) | V.Eal165DcmP | |
| 9800 | drug/metabolite exporter YedA | |||
| 18145 | flagellar basal body P-ring formation protein | |||
| 18150 | M | M.Eal166ORF18255P (100% identity) | M.Eal165ORF18150P | |
| 18155 | R | EalLWGAORF18350P (100% identity) | Eal165ORF18150P | |
| 18160 | flagellar biosynthesis anti-sigma factor FlgM | |||
| plasmid pESA136_1 | ||||
| 23455 | 277 aa hypothetical protein | |||
| 23460 | M | M.YpsF1ORFDP (100% identity) | M.Eal165ORF23460P | |
| 23465 | DNA-binding protein | |||
| 23600 | 202 aa hypothetical protein | |||
| 23605 | M | M.YpsF1ORFBP (100% identity) | M.Eal165ORF23605P | |
| 23610 | 48 aa hypothetical protein | |||
| 24185 | 55 aa hypothetical protein | |||
| 24190 | M | M.YpsF1ORFCP (100% identity) | M.Eal165ORF24190P | |
| 24195 | thermonuclease family protein | |||
| plasmid pESA136_3 | ||||
| 25395 | 101 aa hypothetical protein | |||
| 25400 | M | M.Sso11ORF329P (100% identity) | M.Eal165ORF25400P | |
| 25405 | 73 aa hypothetical protein | |||
| plasmid pESA136_4 | ||||
| 26120 | 73 aa hypothetical protein | |||
| 26125 | M | M.Xca80ORFEP (100% identity) | M.Eal165ORF26125P | |
| 26130 | 97 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pESA136_4 | ||||
| 26245 | 67 aa hypothetical protein | |||
| 26250 | M | M.SspS13ORF650P (100% identity) | M.Eal165ORF26250P | |
| 26255 | R | SspS13ORF650P (100% identity) | Eal165ORF26250P | |
| 26260 | mobilization protein MobX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19840 | endoribonuclease SymE | |||
| 19845 | R | EalTBGAGmrSDP (100% identity) | Eal165GmrSDP | |
| 19850 | GntR family transcriptional regulator | |||
| 20080 | type I restriction-modification system subunit | |||
| 20085 | R | EalEA04McrBP (100% identity) | Eal165McrBP | |
| 20090 | R | EalLWGAMcrCP (99% identity) | Eal165McrCP | |
| 20095 | IS66-like element ISEc8 family transposase | |||