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Putative Escherichia albertii Sample 166 RM systems
Ref: Wang,H. et al. unpublished
REBASE ref # 31829
Sequence length: | GenBank #: | |
Chromosome: | 4,819,744 bp | CP070292 |
plasmid pESA139_1: | 107,432 bp | CP070293 |
plasmid pESA139_3: | 98,546 bp | CP070295 |
REBASE acronym: Eal166
Org_num: 46581
All begin JRC43_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
4360 | transposase | |||
4365 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | Eal166ORF4370P |
4370 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.Eal166ORF4370P |
4375 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.Eal166ORF4370P |
4380 | AAA family ATPase | |||
6145 | IS66-like element ISEc23 family transposase | |||
6150 | R | EalKF1ORF3355P (100% identity) | ACAYNNNNCTG | Eal166ORF6160P |
6155 | S | S.Sen12509ORF5865P (99% identity) | ACAYNNNNCTG | S.Eal166ORF6160P |
??? | M | M.EcoVL02ORF7370P (100% identity) | ACAYNNNNCTG | M.Eal166ORF6160P |
6165 | 293 aa hypothetical protein | |||
19925 | Fic family protein | |||
19930 | R | EalLWGAORF20085P (100% identity) | Eal166ORF19935P | |
19935 | M | M.EalKF1ORF1498P (100% identity) | M.Eal166ORF19935P | |
??? | S | S.EalLWGAORF20085P (100% identity) | S.Eal166ORF19935P | |
19945 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1815 | cell division protein DamX | |||
1820 | M | M.Eco4356DamP (100% identity) | GATC | M.Eal166DamP |
1825 | ribulose-phosphate 3-epimerase | |||
2350 | DUF2556 family protein | |||
2355 | M | M.Eco4356ORFEP (100% identity) | M.Eal166ORF2355P | |
2360 | DNA-binding transcriptional regulator Fis | |||
4060 | BREX-1 system phosphatase PglZ type A | |||
4065 | RM | EcoDEC14DORF5061P (100% identity) | Eal166ORF4065P | |
4070 | BREX system P-loop protein BrxC | |||
7015 | thermonuclease family protein | |||
7020 | M | M.YpsF1ORFCP (100% identity) | M.Eal166ORF7020P | |
7025 | 55 aa hypothetical protein | |||
9360 | integrase | |||
9365 | M | M.EalEA04ORF8780P (100% identity) | GATC | M.Eal166ORF9365P |
9370 | NinE family protein | |||
9860 | TrmB family transcriptional regulator | |||
9865 | M | M.EcoS7438ORFNP (100% identity) | M.Eal166ORF9865P | |
9880 | DUF3927 family protein | |||
9980 | phosphohydrolase | |||
9985 | M | M.EalKF1DcmP (100% identity) | CCWGG | M.Eal166DcmP |
9990 | V | V.Eco4356DcmP (100% identity) | V.Eal166DcmP | |
9995 | drug/metabolite exporter YedA | |||
18250 | flagellar hook-basal body complex protein | |||
18255 | M | M.Eal165ORF18150P (100% identity) | M.Eal166ORF18255P | |
18260 | R | EalLWGAORF18350P (100% identity) | Eal166ORF18255P | |
18265 | flagellar biosynthesis anti-sigma factor FlgM | |||
plasmid pESA139_1 | ||||
23855 | 97 aa hypothetical protein | |||
23860 | M | M.Xca80ORFEP (100% identity) | M.Eal166ORF23860P | |
23865 | 73 aa hypothetical protein | |||
plasmid pESA139_3 | ||||
25120 | 85 aa hypothetical protein | |||
25125 | M | M.EfeD053ORF22855P (100% identity) | M.Eal166ORF25125P | |
25130 | recombination-associated protein RdgC | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
plasmid pESA139_1 | ||||
23705 | mobilization protein MobX | |||
23710 | R | SspS13ORF650P (100% identity) | Eal166ORF23765P | |
23715 | site-specific DNA-methyltransferase | |||
23720 | IS6-like element IS26 family transposase | |||
23725 | replication initiation protein | |||
23730 | DNA-binding protein | |||
23735 | 49 aa hypothetical protein | |||
23740 | 179 aa hypothetical protein | |||
23745 | 149 aa hypothetical protein | |||
23750 | 180 aa hypothetical protein | |||
23755 | 135 aa hypothetical protein | |||
23760 | 67 aa hypothetical protein | |||
23765 | M | M.SspS13ORF650P (78% identity) | M.Eal166ORF23765P | |
23770 | IS6 family transposase | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
19945 | endoribonuclease SymE | |||
19950 | R | EalTBGAGmrSDP (100% identity) | Eal166GmrSDP | |
19955 | GntR family transcriptional regulator |