Escherichia albertii Sample 170 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia albertii Sample 170 RM systems
Ref: Wang,H. et al. unpublished
REBASE ref # 31829
| Sequence length: | GenBank #: | |
| Chromosome: | 4,752,867 bp | CP070281 |
| plasmid pESA135_1: | 120,691 bp | CP070282 |
| plasmid pESA135_2: | 176,494 bp | CP070283 |
REBASE acronym: EalS170
Org_num: 46585
All begin JRC42_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19865 | 322 aa hypothetical protein | |||
| 19870 | R | Eal169ORF19875P (100% identity) | EalS170ORF19875P | |
| 19875 | M | M.Eal169ORF19875P (100% identity) | M.EalS170ORF19875P | |
| 19880 | S | S.Eal169ORF19875P (100% identity) | S.EalS170ORF19875P | |
| 19885 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1660 | cell division protein DamX | |||
| 1665 | M | M.Eco4356DamP (100% identity) | GATC | M.EalS170DamP |
| 1670 | ribulose-phosphate 3-epimerase | |||
| 2170 | DUF2556 family protein | |||
| 2175 | M | M.Eco4356ORFEP (100% identity) | M.EalS170ORF2175P | |
| 2180 | DNA-binding transcriptional regulator Fis | |||
| 6695 | flagella biosynthesis regulator Flk | |||
| 6700 | M | M.Eal169ORF6700P (100% identity) | M.EalS170ORF6700P | |
| 6705 | Com family DNA-binding transcriptional | |||
| 7570 | DUF1804 family protein | |||
| 7575 | M | M.EalS170ORF17595P (100% identity) | M.EalS170ORF7575P | |
| 7580 | phage terminase large subunit | |||
| 9360 | phosphohydrolase | |||
| 9365 | M | M.Eal169DcmP (100% identity) | CCWGG | M.EalS170DcmP |
| 9370 | V | V.Eal169DcmP (100% identity) | V.EalS170DcmP | |
| 9375 | drug/metabolite exporter YedA | |||
| 13490 | DUF1804 family protein | |||
| 13495 | M | M.EalS170ORF7575P (100% identity) | M.EalS170ORF13495P | |
| 13500 | phage terminase large subunit | |||
| 14275 | NinE family protein | |||
| 14280 | M | M.Eal169ORF14280P (100% identity) | GATC | M.EalS170ORF14280P |
| 14285 | recombination protein NinB | |||
| 17590 | DUF1804 family protein | |||
| 17595 | M | M.EalS170ORF7575P (100% identity) | M.EalS170ORF17595P | |
| 17600 | phage terminase large subunit | |||
| 19405 | IS21-like element ISSen3 family helper ATPase | |||
| 19410 | M | M.Eal169ORF19410P (100% identity) | M.EalS170ORF19410P | |
| 19415 | 150 aa hypothetical protein | |||
| plasmid pESA135_1 | ||||
| 23795 | 73 aa hypothetical protein | |||
| 23800 | M | M.EcoR3001ORF25605P (100% identity) | M.EalS170ORF23800P | |
| 23805 | 101 aa hypothetical protein | |||
| plasmid pESA135_2 | ||||
| 24400 | IS110-like element ISShdy1 family transposase | |||
| 24405 | M | M.Sen527ORF25750P (100% identity) | M.EalS170ORF24405P | |
| 24410 | 73 aa hypothetical protein | |||
| 24945 | 73 aa hypothetical protein | |||
| 24950 | M | M.Eal169ORF24800P (100% identity) | M.EalS170ORF24950P | |
| 24955 | SOS response-associated peptidase family | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19885 | endoribonuclease SymE | |||
| 19890 | R | Eal3866McrB2P (98% identity) | EalS170McrBP | |
| 19895 | R | Eal169McrCP (100% identity) | EalS170McrCP | |
| 19900 | 359 aa hypothetical protein | |||