Escherichia coli RIVM_C028613 |
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Putative Escherichia coli RIVM_C028613 RM systems
Ref: Hendrickx,A.P.A. et al. unpublished
REBASE ref # 31854
Complete sequence: 5,385,668 bp
GenBank #: CP068814
REBASE acronym: Eco28613
Org_num: 46774
All begin JNN56_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 435 | MmcB family DNA repair protein | |||
| 440 | R | EcoCase6ORF480P (100% identity) | CAAYNNNNNCTGC | Eco28613ORF445P |
| 445 | M | M.SflN116ORF3940P (100% identity) | CAAYNNNNNCTGC | M.Eco28613ORF445P |
| 450 | S | S.SflN116ORF3940P (100% identity) | CAAYNNNNNCTGC | S.Eco28613ORF445P |
| 455 | AAA family ATPase | |||
| 21945 | restriction endonuclease | |||
| ??? | M | M.EcoSC054ORF4200P (100% identity) | GGYANNNNNGTNG | M.Eco28613ORF21950P |
| 21955 | S | S.Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | S.Eco28613ORF21950P |
| 21960 | R | Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | Eco28613ORF21950P |
| 21965 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2080 | cell division protein DamX | |||
| 2085 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco28613DamP |
| 2090 | ribulose-phosphate 3-epimerase | |||
| 2625 | DUF2556 family protein | |||
| 2630 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.Eco28613ORF2630P |
| 2635 | DNA-binding transcriptional regulator Fis | |||
| 9915 | phosphohydrolase | |||
| 9920 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Eco28613DcmP |
| 9925 | V | V.SsoSE61DcmP (100% identity) | V.Eco28613DcmP | |
| 9930 | drug/metabolite exporter YedA | |||
| 14190 | DUF3927 family protein | |||
| 14205 | M | M.Sso1093ORF10290P (100% identity) | A | M.Eco28613ORF14205P |
| 14210 | TrmB family transcriptional regulator | |||
| 23350 | BREX-1 system phosphatase PglZ type A | |||
| 23355 | RM | EcoCase6ORF23490P (100% identity) | Eco28613ORF23355P | |
| 23360 | BREX system P-loop protein BrxC | |||