Escherichia coli RIVM_C011532 |
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Putative Escherichia coli RIVM_C011532 RM systems
Ref: Hendrickx,A.P.A. et al. unpublished
REBASE ref # 31854
Complete sequence: 4,884,056 bp
GenBank #: CP068795
REBASE acronym: Eco11532
Org_num: 46754
All begin JNN54_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 395 | MmcB family DNA repair protein | |||
| 400 | R | EcoCase6ORF480P (100% identity) | CAAYNNNNNCTGC | Eco11532ORF405P |
| 405 | M | M.SflN116ORF3940P (100% identity) | CAAYNNNNNCTGC | M.Eco11532ORF405P |
| 410 | S | S.SflN116ORF3940P (100% identity) | CAAYNNNNNCTGC | S.Eco11532ORF405P |
| 415 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2180 | cell division protein DamX | |||
| 2185 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco11532DamP |
| 2190 | ribulose-phosphate 3-epimerase | |||
| 2805 | DUF2556 family protein | |||
| 2810 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco11532ORF2810P |
| 2815 | DNA-binding transcriptional regulator Fis | |||
| 9130 | phosphohydrolase | |||
| 9135 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.Eco11532DcmP |
| 9140 | V | V.EcosEC7DcmP (100% identity) | V.Eco11532DcmP | |
| 9145 | drug/metabolite exporter YedA | |||
| 9555 | HNH endonuclease | |||
| 9560 | M | M.EcosEC5ORF9430P (100% identity) | M.Eco11532ORF9560P | |
| 9565 | YqaJ viral recombinase family protein | |||
| 18415 | phage lysis protein EssD | |||
| 18420 | M | M.Ecoi012ORF10825P (100% identity) | M.Eco11532ORF18420P | |
| 18425 | TrmB family transcriptional regulator | |||
| 18425 | TrmB family transcriptional regulator | |||
| 18430 | R | EcoS0247ORF16915AP (100% identity) | R1.Eco11532ORF18440P | |
| 18435 | R | R2.Eco29952ORF21235P (100% identity) | R2.Eco11532ORF18440P | |
| 18440 | M | M.EcoST131ORF16015P (100% identity) | M.Eco11532ORF18440P | |
| 18445 | antitermination protein | |||
| 20545 | osmoprotectant transport activator ProQ | |||
| 20550 | M | M.SflFF24DndBP (100% identity) | M.Eco11532DndBP | |
| 20555 | DNA phosphorothioation system sulfurtransferase | |||
| 20550 | DNA sulfur modification protein DndB | |||
| 20555 | M | M.SflFF24DndCP (100% identity) | M.Eco11532DndCP | |
| 20560 | DNA sulfur modification protein DndD | |||
| 20555 | DNA phosphorothioation system sulfurtransferase | |||
| 20560 | M | M.SflFF24DndDP (100% identity) | M.Eco11532DndDP | |
| 20565 | DNA sulfur modification protein DndE | |||
| 20560 | DNA sulfur modification protein DndD | |||
| 20565 | M | M.SflFF24DndEP (100% identity) | M.Eco11532DndEP | |
| 20570 | 128 aa hypothetical protein | |||
| 20600 | accessory gene regulator B family protein | |||
| 20605 | R | EcosEC5DptHP (100% identity) | Eco11532DptHP | |
| 20610 | DNA phosphorothioation-dependent restriction | |||
| 20610 | R | SflFF24DptGP (100% identity) | Eco11532DptGP | |
| 20615 | DNA phosphorothioation-dependent restriction | |||
| 20610 | DNA phosphorothioation-dependent restriction | |||
| 20615 | R | SflFF24DptFP (100% identity) | Eco11532DptFP | |
| 20620 | porin family protein | |||