Escherichia coli O157:H7 Z885 |
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Putative Escherichia coli O157:H7 Z885 RM systems
Ref: Fitzgerald,S. et al. unpublished
REBASE ref # 31844
| Sequence length: | GenBank #: | |
| Chromosome: | 5,529,386 bp | CP062763 |
| plasmid pZ885-1: | 92,164 bp | CP062764 |
REBASE acronym: EcoZ885
Org_num: 46728
All begin ILQ36_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24215 | DUF262 domain-containing protein | |||
| 24220 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoZ885ORF24225P |
| 24225 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoZ885ORF24225P |
| 24230 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoZ885ORF24225P |
| 24235 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2290 | cell division protein DamX | |||
| 2295 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoZ885DamP |
| 2300 | ribulose-phosphate 3-epimerase | |||
| 2805 | DUF2556 family protein | |||
| 2810 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoZ885ORF2810P |
| 2815 | DNA-binding transcriptional regulator Fis | |||
| 7665 | recombination protein NinB | |||
| 7670 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoZ885ORF7670P |
| 7675 | NinE family protein | |||
| 10105 | recombination protein NinB | |||
| 10110 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoZ885ORF10110P |
| 10115 | NinE family protein | |||
| 11405 | TrmB family transcriptional regulator | |||
| 11410 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoZ885ORF11410P | |
| 11425 | DUF1737 domain-containing protein | |||
| 11690 | epoxyqueuosine reductase QueH | |||
| 11695 | M | M.EcoZ910ORF13770P (100% identity) | GCCGGC | M.EcoZ885ORF11695P |
| 11700 | R | EcoZ910ORF13770P (100% identity) | GCCGGC | EcoZ885ORF11695P |
| 11705 | 90 aa hypothetical protein | |||
| 11725 | TrmB family transcriptional regulator | |||
| 11730 | M | M.EcoZ910ORF13805P (100% identity) | M.EcoZ885ORF11730P | |
| 11735 | DUF1737 domain-containing protein | |||
| 16035 | drug/metabolite exporter YedA | |||
| 16040 | V | V.EcosPA8DcmP (100% identity) | V.EcoZ885DcmP | |
| 16045 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoZ885DcmP |
| 16050 | phosphohydrolase | |||
| 24465 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoZ885ORF24465P |
| 24470 | DEAD/DEAH box helicase | |||
| 24500 | N-acetylneuraminic acid mutarotase | |||
| 24505 | R | Ecos1613ORF26795P (100% identity) | EcoZ885ORF24505P | |
| 24510 | transposase | |||
| plasmid pZ885-1 | ||||
| 27670 | 101 aa hypothetical protein | |||
| 27675 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoZ885ORF27675P | |
| 27680 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24235 | endoribonuclease SymE | |||
| 24240 | R | EcosPA8GmrSDP (55% identity) | EcoZ885GmrDP | |
| 24245 | R | Ecos1613GmrSP (100% identity) | EcoZ885GmrSP | |
| 24250 | DUF1127 domain-containing protein | |||