Escherichia coli O157:H7 Z892 |
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Putative Escherichia coli O157:H7 Z892 RM systems
Ref: Fitzgerald,S. et al. unpublished
REBASE ref # 31844
| Sequence length: | GenBank #: | |
| Chromosome: | 5,506,956 bp | CP062758 |
| plasmid pZ892-1: | 92,766 bp | CP062759 |
REBASE acronym: EcoZ892
Org_num: 46730
All begin ILQ38_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24095 | DUF262 domain-containing protein | |||
| 24100 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoZ892ORF24105P |
| 24105 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoZ892ORF24105P |
| 24110 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoZ892ORF24105P |
| 24115 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2260 | cell division protein DamX | |||
| 2265 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoZ892DamP |
| 2270 | ribulose-phosphate 3-epimerase | |||
| 2775 | DUF2556 family protein | |||
| 2780 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoZ892ORF2780P |
| 2785 | DNA-binding transcriptional regulator Fis | |||
| 7635 | recombination protein NinB | |||
| 7640 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoZ892ORF7640P |
| 7645 | NinE family protein | |||
| 10080 | recombination protein NinB | |||
| 10085 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoZ892ORF10085P |
| 10090 | NinE family protein | |||
| 10865 | phosphohydrolase | |||
| 10870 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoZ892DcmP |
| 10875 | V | V.EcosPA8DcmP (100% identity) | V.EcoZ892DcmP | |
| 10880 | drug/metabolite exporter YedA | |||
| 14765 | DUF1737 domain-containing protein | |||
| 14770 | M | M.EcoZ910ORF13805P (100% identity) | M.EcoZ892ORF14770P | |
| 14775 | TrmB family transcriptional regulator | |||
| 14795 | 90 aa hypothetical protein | |||
| 14800 | R | EcoZ910ORF13770P (100% identity) | GCCGGC | EcoZ892ORF14805P |
| 14805 | M | M.EcoZ910ORF13770P (100% identity) | GCCGGC | M.EcoZ892ORF14805P |
| 14810 | epoxyqueuosine reductase QueH | |||
| 15405 | DUF1737 domain-containing protein | |||
| 15420 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoZ892ORF15420P | |
| 15425 | TrmB family transcriptional regulator | |||
| 24345 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoZ892ORF24345P |
| 24350 | DEAD/DEAH box helicase | |||
| 24380 | N-acetylneuraminic acid mutarotase | |||
| 24385 | R | Ecos1613ORF26795P (100% identity) | EcoZ892ORF24385P | |
| 24390 | transposase | |||
| plasmid pZ892-1 | ||||
| 27555 | 101 aa hypothetical protein | |||
| 27560 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoZ892ORF27560P | |
| 27565 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24115 | endoribonuclease SymE | |||
| 24120 | R | EcosPA8GmrSDP (55% identity) | EcoZ892GmrDP | |
| 24125 | R | Ecos1613GmrSP (100% identity) | EcoZ892GmrSP | |
| 24130 | DUF1127 domain-containing protein | |||