Escherichia coli O157:H7 Z1830 |
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Putative Escherichia coli O157:H7 Z1830 RM systems
Ref: Fitzgerald,S. et al. unpublished
REBASE ref # 31844
| Sequence length: | GenBank #: | |
| Chromosome: | 5,518,869 bp | CP062713 |
| plasmid pZ1830-1: | 92,742 bp | CP062714 |
REBASE acronym: EcoZ1830
Org_num: 46716
All begin ILQ58_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24175 | DUF262 domain-containing protein | |||
| 24180 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoZ1830ORF24185P |
| 24185 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoZ1830ORF24185P |
| 24190 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoZ1830ORF24185P |
| 24195 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2300 | cell division protein DamX | |||
| 2305 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoZ1830DamP |
| 2310 | ribulose-phosphate 3-epimerase | |||
| 2815 | DUF2556 family protein | |||
| 2820 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoZ1830ORF2820P |
| 2825 | DNA-binding transcriptional regulator Fis | |||
| 7675 | recombination protein NinB | |||
| 7680 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoZ1830ORF7680P |
| 7685 | NinE family protein | |||
| 10120 | recombination protein NinB | |||
| 10125 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoZ1830ORF10125P |
| 10130 | NinE family protein | |||
| 10970 | epoxyqueuosine reductase QueH | |||
| 10975 | M | M.EcoZ910ORF13770P (100% identity) | GCCGGC | M.EcoZ1830ORF10975P |
| 10980 | R | EcoZ910ORF13770P (100% identity) | GCCGGC | EcoZ1830ORF10975P |
| 10985 | 90 aa hypothetical protein | |||
| 11005 | TrmB family transcriptional regulator | |||
| 11010 | M | M.EcoZ910ORF13805P (100% identity) | M.EcoZ1830ORF11010P | |
| 11015 | DUF1737 domain-containing protein | |||
| 11215 | phosphohydrolase | |||
| 11220 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoZ1830DcmP |
| 11225 | V | V.EcosPA8DcmP (100% identity) | V.EcoZ1830DcmP | |
| 11230 | drug/metabolite exporter YedA | |||
| 13430 | TrmB family transcriptional regulator | |||
| 13435 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoZ1830ORF13435P | |
| 13450 | DUF1737 domain-containing protein | |||
| 24425 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoZ1830ORF24425P |
| 24430 | DEAD/DEAH box helicase | |||
| 24460 | N-acetylneuraminic acid mutarotase | |||
| 24465 | R | Ecos1613ORF26795P (100% identity) | EcoZ1830ORF24465P | |
| 24470 | transposase | |||
| plasmid pZ1830-1 | ||||
| 27635 | 101 aa hypothetical protein | |||
| 27640 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoZ1830ORF27640P | |
| 27645 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24195 | endoribonuclease SymE | |||
| 24200 | R | EcosPA8GmrSDP (55% identity) | EcoZ1830GmrDP | |
| 24205 | R | Ecos1613GmrSP (100% identity) | EcoZ1830GmrSP | |
| 24210 | DUF1127 domain-containing protein | |||