Treponema phagedenis T320A |
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Putative Treponema phagedenis T320A RM systems
Ref: Staton,G.J. et al. unpublished
REBASE ref # 32486
Complete sequence: 3,120,315 bp
GenBank #: CP027018
REBASE acronym: TphT320A
Org_num: 49766
All begin C5O78_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8845 | 66 aa hypothetical protein | |||
| 8850 | M | M.TphS85ORF13530P (100% identity) | M.TphT320AORF8850P | |
| 8855 | cell filamentation protein Fic | |||
| 8860 | 43 aa hypothetical protein | |||
| 8865 | S | S.TphV1ORF30177P (30% identity) | S1.TphT320AORF8850P | |
| 8870 | S | S2.TphS85ORF13530P (85% identity) | S2.TphT320AORF8850P | |
| 8875 | R | TphKS1ORF2355P (99% identity) | TphT320AORF8850P | |
| 8880 | MFS transporter | |||
| 10545 | uracil permease | |||
| 10550 | M | M.TphV1ORF40163P (100% identity) | M.TphT320AORF10550P | |
| 10555 | 153 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 780 | 79 aa hypothetical protein | |||
| 785 | M | M.TphB431ORF8155P (100% identity) | M.TphT320AORF785P | |
| 790 | 98 aa hypothetical protein | |||
| 795 | 140 aa hypothetical protein | |||
| 800 | modification methylase | |||
| 805 | R | TphV1ORF10172P (99% identity) | TphT320AORF785P | |
| 810 | 83 aa hypothetical protein | |||
| 795 | 140 aa hypothetical protein | |||
| 800 | M | M.TphV1ORF10172P (98% identity) | M.TphT320AORF800P | |
| 805 | HNH endonuclease | |||
| 845 | 204 aa hypothetical protein | |||
| 850 | M | M.TphB365ORF8000P (97% identity) | M.TphT320AORF850P | |
| 855 | 109 aa hypothetical protein | |||
| 3840 | 579 aa hypothetical protein | |||
| 3845 | M | M1.TphT320AORF8425P (71% identity) | M.TphT320AORF3845P | |
| 3850 | ATP-binding protein | |||
| 5220 | DUF3847 domain-containing protein | |||
| 5225 | R | TphB365ORF9895P (100% identity) | GATC | TphT320AORF5230P |
| 5230 | M | M.TphV1ORF20037P (100% identity) | GATC | M.TphT320AORF5230P |
| 5235 | C | C.TphV1ORF20037P (100% identity) | C.TphT320AORF5230P | |
| 5240 | replication initiation protein | |||
| 6000 | ImmA/IrrE family metallo-endopeptidase | |||
| 6005 | RM | TphS23ORF7595P (99% identity) | TphT320AORF6005P | |
| 6010 | S | S.TphV1ORF20197P (98% identity) | S.TphT320AORF6005P | |
| 6015 | 121 aa hypothetical protein | |||
| 7715 | 172 aa hypothetical protein | |||
| 7720 | M | M.TphV1ORF260015P (99% identity) | M.TphT320AORF7720P | |
| 7725 | 555 aa hypothetical protein | |||
| 7970 | 89 aa hypothetical protein | |||
| 7975 | R | TphKS1ORF725P (68% identity) | TphT320AORF7980P | |
| 7980 | M | M.TphS85ORF11405P (99% identity) | M.TphT320AORF7980P | |
| 7985 | 239 aa hypothetical protein | |||
| 8365 | potassium transporter | |||
| 8370 | M | M.TphV1ORF30070P (95% identity) | M.TphT320AORF8370P | |
| 8375 | 39 aa hypothetical protein | |||
| 8395 | DUF1637 domain-containing protein | |||
| 8400 | M | M.TphV1ORF30139P (44% identity) | M.TphT320AORF8400AP | |
| 8405 | methyltransferase | |||
| 8410 | M | M.TphV1ORF30139P (22% identity) | M.TphT320AORF8400BP | |
| 8415 | 63 aa hypothetical protein | |||
| 8420 | 167 aa hypothetical protein | |||
| 8425 | M | M.TphS23ORF4010P (100% identity) | M1.TphT320AORF8425P | |
| 8430 | M | M1.TphT320AORF8425P (78% identity) | M2.TphT320AORF8425P | |
| 8435 | 94 aa hypothetical protein | |||
| 8665 | 184 aa hypothetical protein | |||
| 8670 | M | M.TphKS1AORF16595P (99% identity) | M.TphT320AORF8670P | |
| 8675 | 65 aa hypothetical protein | |||
| 9685 | 196 aa hypothetical protein | |||
| ??? | M | M.TphV1ORF370010P (100% identity) | M.TphT320AORF9690P | |
| 9700 | 288 aa hypothetical protein | |||
| 9740 | TIGR02678 family protein | |||
| ??? | R | TphS85ORF13995P (100% identity) | TphT320AORF9745P | |
| 9750 | DNA methyltransferase | |||
| 10275 | ABC transporter ATP-binding protein | |||
| 10280 | M | M.TphV1ORF40108P (100% identity) | M.TphT320AORF10280P | |
| 10285 | TdeIII family type II restriction endonuclease | |||
| 11835 | 61 aa hypothetical protein | |||
| 11840 | M | M1.TphS85ORF13995P (87% identity) | M1.TphT320AORF11840P | |
| 11845 | M | M2.TphV1ORF510001P (100% identity) | M2.TphT320AORF11840P | |
| 11850 | sucrose-6-phosphate hydrolase | |||
| 14125 | 329 aa hypothetical protein | |||
| 14130 | M | M.TphS85ORF3615P (100% identity) | M.TphT320AORF14130P | |
| 14135 | R | Csh51146ORF549P (78% identity) | TphT320AORF14130P | |
| 14140 | 421 aa hypothetical protein | |||
| 14145 | V | V.TphS85ORF3615P (28% identity) | V.TphT320AORF14130P | |
| 14150 | 53 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3275 | IclR family transcriptional regulator | |||
| 3280 | R | TphB314ORF13350P (99% identity) | TphT320AORF3285P | |
| 3285 | M | M.TphV1ORF140026P (96% identity) | M.TphT320AORF3285P | |
| 3290 | tyrosine phenol-lyase | |||
| 13950 | 207 aa hypothetical protein | |||
| 13955 | R | TphKS1ORF6470P (99% identity) | TphT320AORF13960P | |
| 13960 | M | M.TphV1ORF90024P (97% identity) | M.TphT320AORF13960P | |
| 13965 | ATP-binding protein | |||
| 14100 | XRE family transcriptional regulator | |||
| 14105 | M | M.TphV1ORF90053P (100% identity) | M.TphT320AORF14105P | |
| 14110 | 93 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5260 | 136 aa hypothetical protein | |||
| 5265 | R | Pde20019GmrSDP (99% identity) | TphT320AGmrSDP | |
| 5270 | peptidase T | |||