Escherichia coli FDAARGOS_1278 |
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Putative Escherichia coli FDAARGOS_1278 RM systems
Ref: Sokurenko,E. et al. unpublished
REBASE ref # 31673
| Sequence length: | GenBank #: | |
| Chromosome: | 4,955,833 bp | CP071036 |
| plasmid unnamed2: | 104,015 bp | CP071034 |
| plasmid unnamed3: | 161,598 bp | CP071035 |
| plasmid unnamed4: | 48,183 bp | CP071037 |
REBASE acronym: Eco1278
Org_num: 46611
All begin I6K08_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9680 | adenine/cytosine-specific restriction | |||
| 9685 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | Eco1278ORF9690P |
| 9690 | M | M.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | M.Eco1278ORF9690P |
| 9695 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.Eco1278ORF9690P |
| 9700 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15400 | cell division protein DamX | |||
| 15405 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1278DamP |
| 15410 | ribulose-phosphate 3-epimerase | |||
| 15930 | DUF2556 family protein | |||
| 15935 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.Eco1278ORF15935P |
| 15940 | DNA-binding transcriptional regulator Fis | |||
| 21455 | replication endonuclease | |||
| 21460 | M | M.Sbo812ORFEP (100% identity) | M.Eco1278ORF21460P | |
| 21465 | 330 aa hypothetical protein | |||
| 21470 | R | EcosEC21ORF7960P (100% identity) | Eco1278ORF21460P | |
| 21475 | phage portal protein | |||
| 22400 | HD domain-containing protein | |||
| 22405 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco1278DcmP |
| 22410 | V | V.SflSTLE3DcmP (100% identity) | V.Eco1278DcmP | |
| 22415 | drug/metabolite exporter YedA | |||
| plasmid unnamed2 | ||||
| 745 | 103 aa hypothetical protein | |||
| 750 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.Eco1278ORF750P |
| 755 | 73 aa hypothetical protein | |||
| plasmid unnamed3 | ||||
| 1320 | recombination-associated protein RdgC | |||
| 1325 | M | M.EfeD053ORF22855P (100% identity) | M.Eco1278ORF1325P | |
| 1340 | SPFH/Band 7/PHB domain protein | |||
| 1745 | 103 aa hypothetical protein | |||
| 1750 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.Eco1278ORF1750P |
| 1755 | 73 aa hypothetical protein | |||
| plasmid unnamed4 | ||||
| 25870 | 92 aa hypothetical protein | |||
| 25880 | M | M.EcoR36ORF18275P (100% identity) | M.Eco1278ORF25880P | |
| 25885 | 89 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9675 | GTPase | |||
| 9680 | R | EcosS1MrrP (100% identity) | Eco1278MrrP | |
| 9685 | type I restriction-modification system | |||