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Putative Limosilactobacillus fermentum GR1007 RM systems
Ref: Chen,Y.-T. unpublished
REBASE ref # 32088
Complete sequence: 2,238,385 bp
GenBank #: CP071001
REBASE acronym: Lfe1007
Org_num: 48142
All begin JYQ67_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
9050 | 76 aa hypothetical protein | |||
9055 | R | Lfe8633ORFDP (100% identity) | Lfe1007ORF9085P | |
9060 | IS30 family transposase | |||
9065 | S | S3.Lfe8633ORFDP (100% identity) | S3.Lfe1007ORF9085P | |
9070 | S | S2.LfePCCORF9125P (100% identity) | S2.Lfe1007ORF9085P | |
9075 | tyrosine-type recombinase/integrase | |||
9080 | S | S1.LfePCCORF9125P (100% identity) | S1.Lfe1007ORF9085P | |
9085 | M | M.LfePCCORF9125P (100% identity) | M.Lfe1007ORF9085P | |
9090 | C | C.LfeU21ORF8450P (100% identity) | C.Lfe1007ORF9085P | |
9095 | 298 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
2210 | BREX system P-loop protein BrxC | |||
2215 | RM | LfePCCORF2220P (100% identity) | Lfe1007ORF2215P | |
2220 | site-specific integrase | |||
2220 | site-specific integrase | |||
2225 | RM | LfePCCORF2230P (100% identity) | Lfe1007ORF2225P | |
2230 | BREX-1 system phosphatase PglZ type A | |||
9165 | P27 family phage terminase small subunit | |||
9170 | M | M.LfePCCORF9210AP (100% identity) | M.Lfe1007ORF9170AP | |
9175 | IS3 family transposase | |||
9180 | transposase | |||
??? | M | M.LfePCCORF9210BP (100% identity) | M.Lfe1007ORF9170BP | |
9190 | 206 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
9995 | nucleotide pyrophosphohydrolase | |||
??? | R | Lfe1008ORF9955P (100% identity) | Lfe1007ORF10000P | |
10005 | (deoxy)nucleoside triphosphate |