Limosilactobacillus fermentum GR1008 |
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Putative Limosilactobacillus fermentum GR1008 RM systems
Ref: Chen,Y.-T. unpublished
REBASE ref # 32088
Complete sequence: 2,237,764 bp
GenBank #: CP071000
REBASE acronym: Lfe1008
Org_num: 48143
All begin JYQ65_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9010 | 76 aa hypothetical protein | |||
| 9015 | R | Lfe8633ORFDP (100% identity) | Lfe1008ORF9045P | |
| 9020 | IS30 family transposase | |||
| 9025 | S | S3.Lfe8633ORFDP (100% identity) | S3.Lfe1008ORF9045P | |
| 9030 | S | S2.LfePCCORF9125P (100% identity) | S2.Lfe1008ORF9045P | |
| 9035 | tyrosine-type recombinase/integrase | |||
| 9040 | S | S1.LfePCCORF9125P (100% identity) | S1.Lfe1008ORF9045P | |
| 9045 | M | M.LfePCCORF9125P (100% identity) | M.Lfe1008ORF9045P | |
| 9050 | C | C.LfeU21ORF8450P (100% identity) | C.Lfe1008ORF9045P | |
| 9055 | 298 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2195 | BREX system P-loop protein BrxC | |||
| 2200 | RM | LfePCCORF2220P (100% identity) | Lfe1008ORF2200P | |
| 2205 | site-specific integrase | |||
| 2205 | site-specific integrase | |||
| 2210 | RM | LfePCCORF2230P (100% identity) | Lfe1008ORF2210P | |
| 2215 | BREX-1 system phosphatase PglZ type A | |||
| 9125 | P27 family phage terminase small subunit | |||
| 9130 | M | M.LfePCCORF9210AP (100% identity) | M.Lfe1008ORF9130AP | |
| 9135 | IS3 family transposase | |||
| 9140 | transposase | |||
| ??? | M | M.LfePCCORF9210BP (100% identity) | M.Lfe1008ORF9130BP | |
| 9150 | 206 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9950 | nucleotide pyrophosphohydrolase | |||
| ??? | R | Lfe1007ORF10000P (100% identity) | Lfe1008ORF9955P | |
| 9960 | (deoxy)nucleoside triphosphate | |||