Limosilactobacillus fermentum GR1009 |
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Putative Limosilactobacillus fermentum GR1009 RM systems
Ref: Chen,Y.-T. unpublished
REBASE ref # 32088
Complete sequence: 2,227,144 bp
GenBank #: CP070999
REBASE acronym: Lfe1009
Org_num: 48144
All begin JYQ66_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8960 | 76 aa hypothetical protein | |||
| 8965 | R | Lfe8633ORFDP (100% identity) | Lfe1009ORF8995P | |
| 8970 | IS30 family transposase | |||
| 8975 | S | S3.Lfe8633ORFDP (100% identity) | S3.Lfe1009ORF8995P | |
| 8980 | S | S2.LfePCCORF9125P (100% identity) | S2.Lfe1009ORF8995P | |
| 8985 | tyrosine-type recombinase/integrase | |||
| 8990 | S | S1.LfePCCORF9125P (100% identity) | S1.Lfe1009ORF8995P | |
| 8995 | M | M.LfePCCORF9125P (100% identity) | M.Lfe1009ORF8995P | |
| 9000 | C | C.LfeU21ORF8450P (100% identity) | C.Lfe1009ORF8995P | |
| 9005 | 298 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2140 | BREX system P-loop protein BrxC | |||
| 2145 | RM | LfePCCORF2220P (100% identity) | Lfe1009ORF2145P | |
| 2150 | site-specific integrase | |||
| 2150 | site-specific integrase | |||
| 2155 | RM | LfePCCORF2230P (100% identity) | Lfe1009ORF2155P | |
| 2160 | BREX-1 system phosphatase PglZ type A | |||
| 9075 | P27 family phage terminase small subunit | |||
| 9080 | M | M.LfePCCORF9210AP (100% identity) | M.Lfe1009ORF9080AP | |
| 9085 | IS3 family transposase | |||
| 9090 | transposase | |||
| ??? | M | M.LfePCCORF9210BP (100% identity) | M.Lfe1009ORF9080BP | |
| 9100 | 206 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9905 | nucleotide pyrophosphohydrolase | |||
| 9910 | R | LfePCCORF10020P (100% identity) | Lfe1009ORF9910P | |
| 9915 | (deoxy)nucleoside triphosphate | |||