Escherichia coli BS15R-A |
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Putative Escherichia coli BS15R-A RM systems
Ref: Moser,A.I. et al. unpublished
REBASE ref # 31808
| Sequence length: | GenBank #: | |
| Chromosome: | 4,835,995 bp | CP063349 |
| plasmid pBS15R-A_1: | 121,017 bp | CP063350 |
| plasmid pBS15R-A_3: | 7,750 bp | CP063352 |
REBASE acronym: Eco15RA
Org_num: 46526
All begin IN859_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8930 | toll/interleukin-1 receptor domain-containing | |||
| 8935 | M | M1.Sbo812ORFDP (93% identity) | M1.Eco15RAORF8935P | |
| 8940 | type I restriction-modification system subunit M | |||
| 8945 | IS1 family transposase | |||
| 8950 | M | M2.Eco4527ORFAP (83% identity) | M2.Eco15RAORF8935P | |
| 8955 | S | S.Cko646ORF1190P (97% identity) | S.Eco15RAORF8935P | |
| 8960 | R | EcoTCM3e1ORF20315P (99% identity) | Eco15RAORF8935P | |
| 8965 | N-6 DNA methylase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3230 | DNA-binding transcriptional regulator Fis | |||
| 3235 | M | M.EcotcmA3ORF12410P (100% identity) | ATGCAT | M.Eco15RAORF3235P |
| 3240 | DUF2556 family protein | |||
| 3785 | ribulose-phosphate 3-epimerase | |||
| 3790 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco15RADamP |
| 3795 | cell division protein DamX | |||
| 7570 | PerC family transcriptional regulator | |||
| 7575 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco15RAORF7575P |
| 7580 | LexA family transcriptional regulator | |||
| 13430 | recombination protein NinB | |||
| 13435 | M | M.EcoLHM101ORFIP (96% identity) | GATC | M.Eco15RAORF13435P |
| 13440 | NinE family protein | |||
| 19760 | drug/metabolite exporter YedA | |||
| 19765 | V | V.SsoSE61DcmP (100% identity) | V.Eco15RADcmP | |
| 19770 | M | M.SflWW1DcmP (100% identity) | CCWGG | M.Eco15RADcmP |
| 19775 | phosphohydrolase | |||
| 20000 | phage holin, lambda family | |||
| 20005 | M | M.EfeC23ORF5790P (100% identity) | M.Eco15RAORF20005P | |
| 20010 | TrmB family transcriptional regulator | |||
| 23165 | PerC family transcriptional regulator | |||
| 23170 | M | M.SspPIBORF6330P (100% identity) | M.Eco15RAORF23170P | |
| 23175 | DUF1382 family protein | |||
| plasmid pBS15R-A_1 | ||||
| 23825 | recombination-associated protein RdgC | |||
| 23830 | M | M.EcoC1737ORF25960P (100% identity) | M.Eco15RAORF23830P | |
| 23835 | transposase | |||
| plasmid pBS15R-A_3 | ||||
| 24505 | helix-turn-helix transcriptional regulator | |||
| 24510 | R | EcoE8ORF24655P (100% identity) | Eco15RAORF24515P | |
| 24515 | M | M.EcoE8ORF24655P (100% identity) | M.Eco15RAORF24515P | |
| 24520 | 55 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14080 | TraR/DksA family transcriptional regulator | |||
| 14085 | M | M.Sen663ORF16605P (100% identity) | GATC | M.Eco15RAORF14085P |
| 14090 | replication endonuclease | |||