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Putative Pseudomonas aeruginosa B17932 RM systems
Ref: Veeraraghavan,B. et al. unpublished
REBASE ref # 32037
Complete sequence: 6,847,382 bp
GenBank #: CP070471
REBASE acronym: PaeB17932
Org_num: 48720
All begin JT750_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
495 | site-specific integrase | |||
500 | M | M.Paes32ORF100P (100% identity) | ATGNNNNNNNTCYC | M.PaeB17932ORF500P |
505 | S | S.Paes32ORF100P (100% identity) | ATGNNNNNNNTCYC | S.PaeB17932ORF500P |
510 | R | Paes32ORF100P (100% identity) | ATGNNNNNNNTCYC | PaeB17932ORF500P |
515 | helix-turn-helix transcriptional regulator | |||
2065 | M48 family metallopeptidase | |||
2070 | R | Ssp0042ORF670P (100% identity) | TCCANNNNNNCGT | PaeB17932ORF2105P |
2075 | VWA domain-containing protein | |||
2080 | AAA family ATPase | |||
2085 | PD-(D/E)XK nuclease family protein | |||
2090 | virulence RhuM family protein | |||
2095 | 410 aa hypothetical protein | |||
2100 | S | S.PmoB5ORF1050P (100% identity) | TCCANNNNNNCGT | S.PaeB17932ORF2105P |
2105 | M | M.PmoB5ORF1050P (100% identity) | TCCANNNNNNCGT | M.PaeB17932ORF2105P |
2110 | restriction endonuclease subunit S | |||
2330 | peptidase M15 | |||
2335 | R | PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | PaeB17932ORF2345P |
2340 | HNH endonuclease | |||
2345 | M | M.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | M.PaeB17932ORF2345P |
2350 | S | S.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | S.PaeB17932ORF2345P |
2355 | DUF91 domain-containing protein | |||
31505 | virulence RhuM family protein | |||
31510 | R | SacT018ORFDP (99% identity) | CAGNNNNNNCTCG | PaeB17932ORF31525P |
31515 | anticodon nuclease | |||
31520 | S | S.Pae9BRORFHP (100% identity) | CAGNNNNNNCTCG | S.PaeB17932ORF31525P |
31525 | M | M.SacT018ORFDP (100% identity) | CAGNNNNNNCTCG | M.PaeB17932ORF31525P |
31530 | MarR family transcriptional regulator | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
20 | DNA topoisomerase (ATP-hydrolyzing) subunit B | |||
??? | RM | PaeP13ORF7605P (100% identity) | PaeB17932ORF25P | |
30 | 68 aa hypothetical protein | |||
6855 | Arc family DNA-binding protein | |||
6860 | M | M.Paes32ORF1382P (100% identity) | M.PaeB17932ORF6860P | |
6865 | nucleoid-associated protein YejK | |||
19600 | BREX-1 system phosphatase PglZ type A | |||
19605 | RM | PaeP13ORF19625P (97% identity) | PaeB17932ORF19605P | |
19610 | 62 aa hypothetical protein | |||
19620 | 55 aa hypothetical protein | |||
19625 | RM | PaeP13ORF19605P (100% identity) | PaeB17932ORF19625P | |
19630 | BREX system P-loop protein BrxC | |||
20130 | IS3 family transposase | |||
20135 | M | M.PaeP13ORF19105P (100% identity) | M.PaeB17932ORF20135P | |
20140 | 70 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
19565 | IS3 family transposase | |||
19570 | R | Paes32ORF4058P (100% identity) | CACACC | PaeB17932ORF19575P |
19575 | M | M.Paes32ORF4058P (100% identity) | CACACC | M.PaeB17932ORF19575P |
19580 | AIPR family protein |