Pseudomonas aeruginosa B17416 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Pseudomonas aeruginosa B17416 RM systems
Ref: Veeraraghavan,B. et al. unpublished
REBASE ref # 32037
Complete sequence: 6,754,571 bp
GenBank #: CP070467
REBASE acronym: Pae17416
Org_num: 48719
All begin JT749_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1045 | virulence RhuM family protein | |||
| 1050 | R | SacT018ORFDP (99% identity) | CAGNNNNNCTG | Pae17416ORF1065P |
| 1055 | anticodon nuclease | |||
| ??? | S | S2.Pae14690ORFHP (100% identity) | CAGNNNNNCTG | S.Pae17416ORF1065P |
| 1065 | M | M.SacT018ORFDP (100% identity) | CAGNNNNNCTG | M.Pae17416ORF1065P |
| 1070 | MarR family transcriptional regulator | |||
| 1590 | site-specific integrase | |||
| 1595 | M | M.Paes32ORF100P (100% identity) | ATGNNNNNNNTCYC | M.Pae17416ORF1595P |
| 1600 | S | S.Paes32ORF100P (100% identity) | ATGNNNNNNNTCYC | S.Pae17416ORF1595P |
| 1605 | R | Paes32ORF100P (100% identity) | ATGNNNNNNNTCYC | Pae17416ORF1595P |
| 1610 | helix-turn-helix transcriptional regulator | |||
| 3160 | M48 family metallopeptidase | |||
| 3165 | R | Ssp0042ORF670P (100% identity) | TCCANNNNNNCGT | Pae17416ORF3200P |
| 3170 | VWA domain-containing protein | |||
| 3175 | AAA family ATPase | |||
| 3180 | PD-(D/E)XK nuclease family protein | |||
| 3185 | virulence RhuM family protein | |||
| 3190 | 410 aa hypothetical protein | |||
| 3195 | S | S.PmoB5ORF1050P (100% identity) | TCCANNNNNNCGT | S.Pae17416ORF3200P |
| 3200 | M | M.PmoB5ORF1050P (100% identity) | TCCANNNNNNCGT | M.Pae17416ORF3200P |
| 3205 | restriction endonuclease subunit S | |||
| 3425 | peptidase M15 | |||
| 3430 | R | PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | Pae17416ORF3440P |
| 3435 | HNH endonuclease | |||
| 3440 | M | M.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | M.Pae17416ORF3440P |
| 3445 | S | S.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | S.Pae17416ORF3440P |
| 3450 | DUF91 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1115 | DNA topoisomerase (ATP-hydrolyzing) subunit B | |||
| ??? | RM | PaeP13ORF7605P (100% identity) | Pae17416ORF1120P | |
| 1125 | 68 aa hypothetical protein | |||
| 7950 | Arc family DNA-binding protein | |||
| 7955 | M | M.Paes32ORF1382P (100% identity) | M.Pae17416ORF7955P | |
| 7960 | nucleoid-associated protein YejK | |||
| 20695 | BREX-1 system phosphatase PglZ type A | |||
| 20700 | RM | PaeP13ORF19625P (97% identity) | Pae17416ORF20700P | |
| 20705 | 62 aa hypothetical protein | |||
| 20715 | 55 aa hypothetical protein | |||
| 20720 | RM | PaeP13ORF19605P (100% identity) | Pae17416ORF20720P | |
| 20725 | BREX system P-loop protein BrxC | |||
| 21225 | IS3 family transposase | |||
| 21230 | M | M.PaeP13ORF19105P (100% identity) | M.Pae17416ORF21230P | |
| 21235 | 70 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20660 | IS3 family transposase | |||
| 20665 | R | Paes32ORF4058P (100% identity) | CACACC | Pae17416ORF20670P |
| 20670 | M | M.Paes32ORF4058P (100% identity) | CACACC | M.Pae17416ORF20670P |
| 20675 | AIPR family protein | |||