Dysgonomonadaceae bacterium zrk40 |
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Putative Dysgonomonadaceae bacterium zrk40 RM systems
Ref: Zheng,R.K. and Sun,C.M. unpublished
REBASE ref # 29235
Complete sequence: 3,056,350 bp
GenBank #: CP070276
REBASE acronym: Dbazrk40
Org_num: 47230
All begin JS578_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3350 | 232 aa hypothetical protein | |||
| 3355 | M | M.TbaCYCDORF17880P (80% identity) | M.Dbazrk40ORF3355P | |
| 3360 | S | S.EmuK7EMORF9815P (38% identity) | S.Dbazrk40ORF3355P | |
| 3365 | KilA-N domain-containing protein | |||
| 3370 | R | VspLiMORF2600P (70% identity) | Dbazrk40ORF3355P | |
| 3375 | DUF4982 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2665 | 234 aa hypothetical protein | |||
| 2670 | RM | Bsp163ORFAP (61% identity) | Dbazrk40ORF2670P | |
| 2675 | bifunctional | |||
| 3000 | DEAD/DEAH box helicase family protein | |||
| 3005 | RM | Cba002ORF4373P (53% identity) | Dbazrk40ORF3005P | |
| 3010 | 576 aa hypothetical protein | |||
| 3045 | 176 aa hypothetical protein | |||
| 3050 | M | M.Fpe19366ORF2845P (53% identity) | M.Dbazrk40ORF3050P | |
| 3055 | transposase | |||
| 3340 | 354 aa hypothetical protein | |||
| 3345 | M | M.Pgu3856ORF8210P (90% identity) | M.Dbazrk40ORF3345P | |
| 3350 | 232 aa hypothetical protein | |||
| 9590 | 3-5 exonuclease | |||
| 9595 | R | PdiF128ORF22190P (72% identity) | Dbazrk40ORF9600P | |
| 9600 | M | M.PdiF128ORF22190P (66% identity) | M.Dbazrk40ORF9600P | |
| 9605 | tyrosine-type recombinase/integrase | |||
| 12420 | group II intron reverse transcriptase/maturase | |||
| 12425 | R | NbaLBB01ORF4405P (76% identity) | Dbazrk40ORF12435P | |
| 12430 | 105 aa hypothetical protein | |||
| 12435 | M | M.SacSBORF2995P (58% identity) | M.Dbazrk40ORF12435P | |
| 12440 | group II intron reverse transcriptase/maturase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 885 | FRG domain-containing protein | |||
| 890 | R | FauTH167ORF6170P (73% identity) | Dbazrk40ORF895P | |
| 895 | M | M.Cpe01ORF7320P (56% identity) | M.Dbazrk40ORF895P | |
| 900 | Abi family protein | |||