Bacteroides fragilis FDAARGOS_1225 |
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Putative Bacteroides fragilis FDAARGOS_1225 RM systems
Ref: Carlson,P. et al. unpublished
REBASE ref # 31676
Complete sequence: 5,150,703 bp
GenBank #: CP069563
REBASE acronym: Bfr1225
Org_num: 46250
All begin I6J55_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4870 | helix-turn-helix transcriptional regulator | |||
| 4875 | R | BfrBOB25ORF5030P (100% identity) | Bfr1225ORF4890P | |
| 4880 | 307 aa hypothetical protein | |||
| 4885 | DUF262 domain-containing protein | |||
| 4890 | M | M.BfrBOB25ORF5030P (100% identity) | M.Bfr1225ORF4890P | |
| 4895 | virulence RhuM family protein | |||
| 4900 | S | S4.Pdi162ORF12215P (82% identity) | S1.Bfr1225ORF4890P | |
| 4905 | S | S2.PdiC09ORF553P (96% identity) | S2.Bfr1225ORF4890P | |
| 4910 | S | S3.Pdi244ORF10590P (100% identity) | S3.Bfr1225ORF4890P | |
| 4915 | S | S1.Pvu1098ORF10145P (93% identity) | S4.Bfr1225ORF4890P | |
| 4920 | site-specific integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1490 | transposase | |||
| 1500 | RM | PmeBin96ORFBP (97% identity) | Bfr1225ORF1500P | |
| 1505 | helix-turn-helix domain-containing protein | |||
| 3795 | 241 aa hypothetical protein | |||
| 3800 | M | M.PvuC06ORF1788P (100% identity) | M.Bfr1225ORF3800P | |
| 3805 | DUF5045 domain-containing protein | |||
| 4320 | 72 aa hypothetical protein | |||
| 4325 | M | M.UviJGIORFFP (99% identity) | M.Bfr1225ORF4325P | |
| 4330 | 208 aa hypothetical protein | |||
| 5110 | nitroreductase | |||
| 5115 | R | BfrP207ORF1690P (99% identity) | Bfr1225ORF5115P | |
| 5120 | YigZ family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8680 | discoidin domain-containing protein | |||
| 8685 | M | M.BfrFAAORFBP (99% identity) | M.Bfr1225ORF8685P | |
| 8690 | R | BfrBOB25ORF4955P (99% identity) | Bfr1225ORF8685P | |
| 8695 | RNA pseudouridine synthase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20625 | pyridoxamine 5-phosphate oxidase family | |||
| 20630 | R | BfrP207GmrSDP (100% identity) | Bfr1225GmrSDP | |
| 20645 | imidazole glycerol phosphate synthase subunit | |||