Escherichia coli FDAARGOS_1298 |
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Putative Escherichia coli FDAARGOS_1298 RM systems
Ref: Sokurenko,E. et al. unpublished
REBASE ref # 31673
| Sequence length: | GenBank #: | |
| Chromosome: | 5,105,031 bp | CP070115 |
| plasmid unnamed3: | 69,978 bp | CP070118 |
REBASE acronym: Eco1298
Org_num: 46630
All begin I6K28_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3710 | adenine/cytosine-specific restriction | |||
| 3715 | R | EcosS1ORF16790P (99% identity) | CCANNNNNNNCTTC | Eco1298ORF3720P |
| 3720 | M | M.Ecoppa1ORF6185P (100% identity) | CCANNNNNNNCTTC | M.Eco1298ORF3720P |
| 3725 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.Eco1298ORF3720P |
| 3730 | endoribonuclease SymE | |||
| 11060 | IS5-like element ISKpn26 family transposase | |||
| 11065 | R | SdyFF51ORF19255P (99% identity) | AAAYNNNNNNCTC | Eco1298ORF11075P |
| 11070 | S | S.Sfl877II (100% identity) | AAAYNNNNNNCTC | S.Eco1298ORF11075P |
| 11075 | M | M.EcoH238ORFAP (99% identity) | AAAYNNNNNNCTC | M.Eco1298ORF11075P |
| 11080 | GTPase family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 640 | LexA family transcriptional regulator | |||
| 645 | M | M.EcosEC8ORF20220P (100% identity) | GATC | M.Eco1298ORF645P |
| 650 | PerC family transcriptional regulator | |||
| 3960 | HNH endonuclease | |||
| 3965 | R | Ecoi127aORF4076P (100% identity) | Eco1298ORF3965P | |
| 3970 | 59 aa hypothetical protein | |||
| 5765 | LexA family transcriptional regulator | |||
| 5770 | M | M.SflFF35ORF16050P (100% identity) | GATC | M.Eco1298ORF5770P |
| 5775 | PerC family transcriptional regulator | |||
| 9410 | cell division protein DamX | |||
| 9415 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1298DamP |
| 9420 | ribulose-phosphate 3-epimerase | |||
| 10010 | DUF2556 family protein | |||
| 10015 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco1298ORF10015P |
| 10020 | DNA-binding transcriptional regulator Fis | |||
| 13935 | PerC family transcriptional regulator | |||
| 13940 | M | M.Ecoppa1ORF22275P (100% identity) | GATC | M.Eco1298ORF13940P |
| 13945 | LexA family transcriptional regulator | |||
| 18115 | phosphohydrolase | |||
| 18120 | M | M.EcoXMDcmP (100% identity) | CCWGG | M.Eco1298DcmP |
| 18125 | V | V.SflC32DcmP (74% identity) | V.Eco1298DcmP | |
| 18130 | drug/metabolite exporter YedA | |||
| 21360 | DUF1737 domain-containing protein | |||
| 21380 | M | M.SboBSORF1444P (100% identity) | A | M.Eco1298ORF21380P |
| 21385 | TrmB family transcriptional regulator | |||
| plasmid unnamed3 | ||||
| 25775 | 73 aa hypothetical protein | |||
| 25780 | M | M.Ecop11BORF27295P (100% identity) | M.Eco1298ORF25780P | |
| 25785 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3705 | GTPase | |||
| 3710 | R | EcosS1MrrP (100% identity) | Eco1298MrrP | |
| 3715 | type I restriction-modification system | |||
| 14135 | recombinase family protein | |||
| 14140 | R | EspFAAGmrSDP (100% identity) | Eco1298GmrSDP | |
| 14145 | DinI-like family protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22235 | NinE family protein | |||
| 22240 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco1298ORF22240P |
| 22245 | recombination protein NinB | |||