Escherichia coli FDAARGOS_1292 |
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Putative Escherichia coli FDAARGOS_1292 RM systems
Ref: Sokurenko,E. et al. unpublished
REBASE ref # 31673
| Sequence length: | GenBank #: | |
| Chromosome: | 4,982,306 bp | CP070124 |
| plasmid unnamed1: | 114,213 bp | CP070125 |
| plasmid unnamed4: | 5,171 bp | CP070128 |
REBASE acronym: Eco1292
Org_num: 46625
All begin I6K22_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 350 | McrC family protein | |||
| 355 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco1292ORF360P |
| 360 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.Eco1292ORF360P |
| 365 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M2.Eco1292ORF360P |
| 370 | IS3 family transposase | |||
| 615 | 174 aa hypothetical protein | |||
| 620 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.Eco1292ORF620P |
| 625 | ATP-binding protein | |||
| 630 | 126 aa hypothetical protein | |||
| 635 | R | EcoSCU306ORF19130P (100% identity) | Eco1292ORF635P | |
| 640 | 97 aa hypothetical protein | |||
| 2400 | phage lysis protein EssD | |||
| 2405 | M | M.Sso63633ORF22290P (100% identity) | M.Eco1292ORF2405P | |
| 2410 | 67 aa hypothetical protein | |||
| 2440 | LexA family transcriptional regulator | |||
| 2445 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco1292ORF2445P |
| 2450 | PerC family transcriptional regulator | |||
| 6180 | cell division protein DamX | |||
| 6185 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1292DamP |
| 6190 | ribulose-phosphate 3-epimerase | |||
| 6780 | DUF2556 family protein | |||
| 6785 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco1292ORF6785P |
| 6790 | DNA-binding transcriptional regulator Fis | |||
| 10370 | PerC family transcriptional regulator | |||
| 10375 | M | M.EcoY26ORF4515P (100% identity) | GATC | M.Eco1292ORF10375P |
| 10380 | LexA family transcriptional regulator | |||
| 14135 | phosphohydrolase | |||
| 14140 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco1292DcmP |
| 14145 | V | V.EcosC25DcmP (100% identity) | V.Eco1292DcmP | |
| 14150 | drug/metabolite exporter YedA | |||
| 17375 | DUF1737 domain-containing protein | |||
| 17395 | M | M.SboBSORF1444P (100% identity) | A | M.Eco1292ORF17395P |
| 17400 | TrmB family transcriptional regulator | |||
| plasmid unnamed1 | ||||
| 24395 | 73 aa hypothetical protein | |||
| 24400 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.Eco1292ORF24400P |
| 24405 | 103 aa hypothetical protein | |||
| plasmid unnamed4 | ||||
| 24665 | M | M.SflFF34ORF24420P (99% identity) | CCNGG | M.Eco1292ORF24665P |
| 24670 | R | KpnDJORFGP (95% identity) | CCNGG | Eco1292ORF24665P |
| 24675 | Rop family plasmid primer RNA-binding protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 340 | glycosyltransferase family 2 protein | |||
| 345 | R | EcosS3McrBP (100% identity) | Eco1292McrBP | |
| 350 | R | EcosS9McrCP (100% identity) | Eco1292McrCP | |
| 355 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 10570 | recombinase family protein | |||
| 10575 | R | EspFAAGmrSDP (100% identity) | Eco1292GmrSDP | |
| 10580 | DinI-like family protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18245 | NinE family protein | |||
| 18250 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco1292ORF18250P |
| 18255 | recombination protein NinB | |||