Escherichia coli FDAARGOS_1300 |
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Putative Escherichia coli FDAARGOS_1300 RM systems
Ref: Sokurenko,E. et al. unpublished
REBASE ref # 31673
| Sequence length: | GenBank #: | |
| Chromosome: | 5,171,181 bp | CP069996 |
| plasmid unnamed1: | 47,037 bp | CP069997 |
| plasmid unnamed3: | 82,270 bp | CP069999 |
REBASE acronym: Eco1300
Org_num: 46632
All begin I6K30_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6210 | 322 aa hypothetical protein | |||
| 6215 | R | SflC32ORFCP (100% identity) | AAGNNNNNNNRTDCC | Eco1300ORF6220P |
| 6220 | M | M.SspS13ORF3945P (100% identity) | AAGNNNNNNNRTDCC | M.Eco1300ORF6220P |
| 6225 | S | S.SflC32ORFCP (100% identity) | AAGNNNNNNNRTDCC | S.Eco1300ORF6220P |
| 6230 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4345 | 253 aa hypothetical protein | |||
| 4350 | R | Ecos67ORF8885P (100% identity) | Eco1300ORF4355P | |
| 4355 | M | M.Ecos67ORF8885P (100% identity) | M.Eco1300ORF4355P | |
| 4360 | 59 aa hypothetical protein | |||
| 8940 | class II holin family protein | |||
| 8945 | M | M.Sso63633ORF22290P (100% identity) | M.Eco1300ORF8945P | |
| 8950 | 67 aa hypothetical protein | |||
| 8980 | LexA family transcriptional regulator | |||
| 8985 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco1300ORF8985P |
| 8990 | 330 aa hypothetical protein | |||
| 12935 | cell division protein DamX | |||
| 12940 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1300DamP |
| 12945 | ribulose-phosphate 3-epimerase | |||
| 13540 | DUF2556 family protein | |||
| 13545 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco1300ORF13545P |
| 13550 | DNA-binding transcriptional regulator Fis | |||
| 17780 | DUF1382 family protein | |||
| 17785 | M | M.EcosalpORF20815P (100% identity) | M.Eco1300ORF17785P | |
| 17790 | PerC family transcriptional regulator | |||
| 20915 | phosphohydrolase | |||
| 20920 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.Eco1300DcmP |
| 20925 | V | V.EcosEC7DcmP (100% identity) | V.Eco1300DcmP | |
| 20930 | drug/metabolite exporter YedA | |||
| 24560 | DUF1737 domain-containing protein | |||
| 24580 | M | M.EcoY26ORF70P (100% identity) | A | M.Eco1300ORF24580P |
| 24585 | TrmB family transcriptional regulator | |||
| plasmid unnamed1 | ||||
| 25485 | 73 aa hypothetical protein | |||
| 25490 | M | M.Sso866ORF27155P (100% identity) | M.Eco1300ORF25490P | |
| 25495 | 104 aa hypothetical protein | |||
| plasmid unnamed3 | ||||
| 26610 | 73 aa hypothetical protein | |||
| 26615 | M | M.Sso866ORF27155P (100% identity) | M.Eco1300ORF26615P | |
| 26620 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7555 | 63 aa hypothetical protein | |||
| 7560 | M | M.Kpn1417ORF280P (88% identity) | M.Eco1300ORF7560P | |
| 7565 | R | Eco3033ORFJP (97% identity) | Eco1300ORF7560P | |
| 7570 | DUF1281 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6230 | endoribonuclease SymE | |||
| 6235 | R | Eho218GmrDP (100% identity) | Eco1300GmrDP | |
| 6240 | 26 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1690 | replication endonuclease | |||
| 1695 | M | M.Sen663ORF16605P (100% identity) | GATC | M.Eco1300ORF1695P |
| 1700 | TraR/DksA family transcriptional regulator | |||