Salmonella enterica FDAARGOS_1271 |
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Putative Salmonella enterica FDAARGOS_1271 RM systems
Ref: Kerrigan,L. et al. unpublished
REBASE ref # 31618
| Sequence length: | GenBank #: | |
| Chromosome: | 4,675,929 bp | CP069518 |
| plasmid unnamed: | 128,163 bp | CP069519 |
REBASE acronym: Sen1271
Org_num: 46854
All begin I6K01_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8965 | 62 aa hypothetical protein | |||
| 8970 | S | S.SenSmo02ORF2495P (100% identity) | S.Sen1271ORF8975P | |
| 8975 | M | M.SenSmo02ORF2495P (100% identity) | M.Sen1271ORF8975P | |
| 8980 | M48 family metallopeptidase | |||
| 8980 | M48 family metallopeptidase | |||
| 8985 | R | SenSmo02ORF2465P (100% identity) | GNNTAYNNNNNRTGG | Sen1271ORF9005P |
| 8990 | DUF262 domain-containing protein | |||
| 8995 | DUF262 domain-containing protein | |||
| 9000 | S | S1.SenSmo02ORF2465P (98% identity) | GNNTAYNNNNNRTGG | S.Sen1271ORF9005P |
| 9005 | M | M1.SenSmo02ORF2465P (100% identity) | GNNTAYNNNNNRTGG | M.Sen1271ORF9005P |
| 9010 | type IV toxin-antitoxin system YeeU family | |||
| 9150 | endoribonuclease SymE | |||
| 9155 | S | S.SenSmo02ORF2295P (100% identity) | CGAYNNNNNNNATGC | S.Sen1271ORF9160P |
| 9160 | M | M.SenSmo02ORF2295P (99% identity) | CGAYNNNNNNNATGC | M.Sen1271ORF9160P |
| 9165 | R | SenSmo02ORF2295P (100% identity) | CGAYNNNNNNNATGC | Sen1271ORF9160P |
| 9170 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 340 | 276 aa hypothetical protein | |||
| 345 | M | M.SenSmo02ORF7815P (100% identity) | M.Sen1271ORF345P | |
| 350 | TraR/DksA family transcriptional regulator | |||
| 2805 | replication endonuclease | |||
| 2810 | M | M.SenSmo02ORF9130P (100% identity) | M.Sen1271ORF2810P | |
| 2815 | DUF2732 family protein | |||
| 3715 | DNA-binding transcriptional regulator Fis | |||
| 3720 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen1271ORF3720P |
| 3725 | DUF2556 family protein | |||
| 4200 | ribulose-phosphate 3-epimerase | |||
| 4205 | M | M.StyTDamP (100% identity) | GATC | M.Sen1271DamP |
| 4210 | cell division protein DamX | |||
| 9020 | restriction endonuclease | |||
| 9025 | R | Ssp8103ORF19015P (100% identity) | Sen1271ORF9025P | |
| 9030 | YebC/PmpR family DNA-binding transcriptional | |||
| 19205 | drug/metabolite exporter YedA | |||
| 19210 | V | V.StyUK1DcmP (100% identity) | V.Sen1271DcmP | |
| 19215 | M | M.SspsA7DcmP (100% identity) | CCWGG | M.Sen1271DcmP |
| 19220 | phosphohydrolase | |||
| 21480 | ead/Ea22-like family protein | |||
| 21485 | M | M.SenS1602ORF16345P (100% identity) | M.Sen1271ORF21485P | |
| 21490 | DUF551 domain-containing protein | |||
| plasmid unnamed | ||||
| 23345 | 100 aa hypothetical protein | |||
| 23350 | M | M.KpnFF72ORF28115P (100% identity) | M.Sen1271ORF23350P | |
| 23355 | 98 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11300 | MFS transporter | |||
| 11305 | M | M.Sens679ORF16435P (100% identity) | CAGAG | M.Sen1271ORF11305P |
| 11310 | R | Sens679ORF16435P (100% identity) | CAGAG | Sen1271ORF11305P |
| 11315 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15120 | site-specific DNA recombinase | |||
| 15125 | R | SsoSE61ORF22640P (100% identity) | YCGR | Sen1271ORF15125P |
| 15130 | isocitrate dehydrogenase | |||