Escherichia coli FDAARGOS_1249 |
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Putative Escherichia coli FDAARGOS_1249 RM systems
Ref: Sokurenko,E. et al. unpublished
REBASE ref # 31673
| Sequence length: | GenBank #: | |
| Chromosome: | 5,048,777 bp | CP069459 |
| plasmid unnamed2: | 114,299 bp | CP069461 |
| plasmid unnamed4: | 2,365 bp | CP069463 |
REBASE acronym: Eco1249
Org_num: 46590
All begin I6J79_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14340 | adenine/cytosine-specific restriction | |||
| 14345 | R | Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | Eco1249ORF14350P |
| 14350 | M | M.Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | M.Eco1249ORF14350P |
| ??? | S | S.EcoU90ORF3805P (99% identity) | TGANNNNNNNNTGCT | S.Eco1249ORF14350P |
| 14360 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1960 | phosphohydrolase | |||
| 1965 | M | M.SsoSE61DcmP (99% identity) | CCWGG | M.Eco1249DcmP |
| 1970 | V | V.SsoSE61DcmP (100% identity) | V.Eco1249DcmP | |
| 1975 | drug/metabolite exporter YedA | |||
| 9150 | IS3 family transposase | |||
| 9155 | M | M.EcoR11ORF20620P (86% identity) | M.Eco1249ORF9155P | |
| 9160 | recombination protein NinB | |||
| 15190 | DNA-binding transcriptional regulator Fis | |||
| 15195 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco1249ORF15195P |
| 15200 | DUF2556 family protein | |||
| 15815 | ribulose-phosphate 3-epimerase | |||
| 15820 | M | M.SsoST152DamP (100% identity) | GATC | M.Eco1249DamP |
| 15825 | cell division protein DamX | |||
| plasmid unnamed2 | ||||
| 24735 | 103 aa hypothetical protein | |||
| 24740 | M | M.EcoSCU488ORF25195P (100% identity) | M.Eco1249ORF24740P | |
| 24745 | 73 aa hypothetical protein | |||
| plasmid unnamed4 | ||||
| 25270 | M | M.EcoSCU176ORF24540P (100% identity) | CCGCGG | M.Eco1249ORF25270P |
| 25275 | R | EcoSCU176ORF24540P (100% identity) | CCGCGG | Eco1249ORF25270P |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14335 | GTPase | |||
| 14340 | R | Ssp28760MrrP (100% identity) | Eco1249MrrP | |
| 14345 | type I restriction-modification system | |||
| 14360 | endoribonuclease SymE | |||
| 14365 | R | Ssp28760McrBP (100% identity) | Eco1249McrBP | |
| 14370 | R | Ssp28760McrCP (100% identity) | Eco1249McrCP | |
| 14375 | DUF1998 domain-containing protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8560 | replication endonuclease | |||
| 8565 | M | M.Sen663ORF16605P (100% identity) | GATC | M.Eco1249ORF8565P |
| 8570 | TraR/DksA family transcriptional regulator | |||