Phocaeicola coprophilus FDAARGOS_1220 |
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Putative Phocaeicola coprophilus FDAARGOS_1220 RM systems
Ref: Carlson,P. et al. unpublished
REBASE ref # 31676
Complete sequence: 4,113,613 bp
GenBank #: CP069440
REBASE acronym: Pco1220
Org_num: 48624
All begin I6J50_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6580 | 1256 aa hypothetical protein | |||
| 6585 | R | Pin2837ORF3885P (80% identity) | Pco1220ORF6610P | |
| 6590 | FRG domain-containing protein | |||
| 6595 | 280 aa hypothetical protein | |||
| 6600 | 134 aa hypothetical protein | |||
| 6605 | S | S2.PmeBin2ORFAP (49% identity) | S.Pco1220ORF6610P | |
| 6610 | M | M.MspAJH120ORF9205P (75% identity) | M.Pco1220ORF6610P | |
| 6615 | 35 aa hypothetical protein | |||
| 7645 | DMT family protein | |||
| 7650 | R | PmeBin159ORFAP (98% identity) | Pco1220ORF7675P | |
| 7655 | 229 aa hypothetical protein | |||
| 7660 | AAA family ATPase | |||
| 7665 | S | S.Vpa2008I (41% identity) | S.Pco1220ORF7675P | |
| 7670 | Fic family protein | |||
| 7675 | M | M.PmeBin159ORFAP (96% identity) | M.Pco1220ORF7675P | |
| 7680 | GIY-YIG nuclease family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5665 | conjugative transposon protein TraN | |||
| 5670 | M | M.BfrGS084ORF4024P (98% identity) | M.Pco1220ORF5670P | |
| 5675 | 110 aa hypothetical protein | |||
| 6915 | BREX system P-loop protein BrxC | |||
| 6920 | RM | Bsp737ORF4970P (94% identity) | Pco1220ORF6920P | |
| 6925 | PglZ domain-containing protein | |||
| 10560 | 241 aa hypothetical protein | |||
| 10565 | M | M.PvuC06ORF1788P (100% identity) | M.Pco1220ORF10565P | |
| 10570 | DUF5045 domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7745 | tRNA uridine-5-carboxymethylaminomethyl(34) | |||
| 7750 | C | C.Pme12C32ORF2646P (100% identity) | C.Pco1220ORF7755P | |
| 7755 | M | M.PbaOrORF9125P (35% identity) | M.Pco1220ORF7755P | |
| 7760 | IS1380 family transposase | |||
| 7765 | site-specific DNA-methyltransferase | |||
| 7770 | R | Pdi8503ORF2134P (98% identity) | Pco1220ORF7755P | |
| 7775 | 72 aa hypothetical protein | |||
| 13715 | helix-turn-helix transcriptional regulator | |||
| 13720 | M | M.Cth5807ORF18305P (42% identity) | M.Pco1220ORF13720P | |
| 13725 | R | CklORF3239P (64% identity) | Pco1220ORF13720P | |
| 13730 | RNA-directed DNA polymerase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6980 | IS21-like element helper ATPase IstB | |||
| 6985 | R | Bfr310McrCP (91% identity) | Pco1220McrCP | |
| 6990 | R | BfrIHMA4McrBP (21% identity) | Pco1220McrBP | |
| 6995 | IS1380-like element IS615 family transposase | |||