|
Putative Bacteroides fragilis DK1985 RM systems
Ref: Sydenham,T.V. and Justesen,U.S. unpublished
REBASE ref # 31697
Complete sequence: 5,380,874 bp
GenBank #: CP044428
REBASE acronym: Bfr1985
Org_num: 46249
All begin F7887_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
10850 | flippase-like domain-containing protein | |||
10855 | R | Bfr43858ORF12130P (99% identity) | Bfr1985ORF10860P | |
10860 | M | M.Bfr18BORF19990P (99% identity) | M.Bfr1985ORF10860P | |
10865 | S | S2.BceWH2ORF1017P (39% identity) | S1.Bfr1985ORF10860P | |
10870 | S | S4.Pjo12C29ORF545P (40% identity) | S2.Bfr1985ORF10860P | |
10875 | Fic family protein | |||
10880 | S | S4.Bfr9343IVP (47% identity) | S3.Bfr1985ORF10860P | |
10885 | S | S4.Bfr1512ORF16830P (53% identity) | S4.Bfr1985ORF10860P | |
10890 | site-specific integrase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
5220 | 285 aa hypothetical protein | |||
5225 | RM | Bsp2737ORF6365P (100% identity) | Bfr1985ORF5225P | |
5230 | 108 aa hypothetical protein | |||
9240 | N-6 DNA methylase | |||
9245 | RM | Pvu191ORF4115P (100% identity) | Bfr1985ORF9245P | |
9250 | ATP-dependent helicase | |||
13330 | conjugal transfer protein TraO | |||
13335 | M | M.PdiF128ORF18835P (99% identity) | M.Bfr1985ORF13335P | |
13340 | DUF3872 domain-containing protein | |||
13620 | YigZ family protein | |||
13625 | R | BspZJ18ORF12200P (99% identity) | Bfr1985ORF13625P | |
13630 | nitroreductase family protein | |||
15315 | 106 aa hypothetical protein | |||
15320 | M | M.Bfr435ORF15020P (100% identity) | M.Bfr1985ORF15320P | |
15325 | 139 aa hypothetical protein | |||
15535 | 67 aa hypothetical protein | |||
15540 | M | M.PmeBin12ORFDP (96% identity) | M.Bfr1985ORF15540P | |
15545 | 80 aa hypothetical protein | |||
18575 | 124 aa hypothetical protein | |||
18580 | M | M.Bfr17BORF19915P (99% identity) | M.Bfr1985ORF18580P | |
18585 | toxin Bro | |||
18945 | TraM recognition domain-containing protein | |||
??? | M | M.BxyORF24330P (78% identity) | M.Bfr1985ORF18955P | |
18960 | IS1182-like element ISBf3 family transposase | |||
21595 | BREX system P-loop protein BrxC | |||
21600 | RM | Bfr17BORF22385P (99% identity) | Bfr1985ORF21600P | |
21605 | AAA family ATPase | |||
23285 | integrase | |||
23290 | M | M.Bfa554ORF2235P (81% identity) | M.Bfr1985ORF23290P | |
23295 | RM | Bsa18170ORF1174P (68% identity) | Bfr1985ORF23290P | |
23300 | 422 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
8735 | RNA pseudouridine synthase | |||
8740 | R | BfrQ1F2ORF3510P (100% identity) | Bfr1985ORF8745P | |
8745 | M | M.BfrQ1F2ORF3510P (99% identity) | M.Bfr1985ORF8745P | |
8750 | DUF5110 domain-containing protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
19005 | site-specific integrase | |||
19010 | R | Bsp2737GmrSDP (99% identity) | Bfr1985GmrSDP | |
19015 | 65 aa hypothetical protein |