Bifidobacterium bifidum HN002 |
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Putative Bifidobacterium bifidum HN002 RM systems
Ref: Park,D.-S. unpublished
REBASE ref # 31700
Complete sequence: 2,223,317 bp
GenBank #: CP069279
REBASE acronym: Bfi002
Org_num: 46255
All begin JQN90_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9015 | argininosuccinate lyase | |||
| 9020 | R | BbiBGN4ORF1079P (100% identity) | Bfi002ORF9040P | |
| 9025 | DNA binding domain-containing protein | |||
| 9030 | S | S1.Bbi10347ORF1304P (43% identity) | S2.Bfi002ORF9040P | |
| 9040 | M | M.BbiBGN4ORF1079P (100% identity) | M.Bfi002ORF9040P | |
| 9045 | S | S1.BbiS6ORF5040P (89% identity) | S1.Bfi002ORF9040P | |
| ??? | S | S2.Bbr82IP (71% identity) | S3.Bfi002ORF9040P | |
| 9055 | argininosuccinate synthase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 410 | 211 aa hypothetical protein | |||
| 415 | M | M.BloZJ1ORFBP (99% identity) | M.Bfi002ORF415P | |
| 420 | 466 aa hypothetical protein | |||
| 4225 | 84 aa hypothetical protein | |||
| 4230 | R | BbiBGN4ORF114P (94% identity) | Bfi002ORF4235P | |
| 4235 | M | M.Bbi3115ORF1711P (98% identity) | M.Bfi002ORF4235P | |
| 4240 | 91 aa hypothetical protein | |||
| 5150 | type II toxin-antitoxin system RelB/DinJ family | |||
| 5155 | M | M.BbiBGN4ORF290P (100% identity) | TCCGGA | M.Bfi002ORF5155P |
| 5160 | R | BspTKUORF1745P (99% identity) | TCCGGA | Bfi002ORF5155P |
| 5165 | type II toxin-antitoxin system RelB/DinJ family | |||
| 6255 | methyltransferase | |||
| 6260 | R | PmeBin303ORFBP (100% identity) | C | Bfi002ORF6260P |
| 6265 | GTPase HflX | |||
| 6990 | site-specific integrase | |||
| 6995 | M | M.BbiS6ORF7275P (100% identity) | M.Bfi002ORF6995P | |
| 7000 | R | PmeBin303ORFDP (100% identity) | Bfi002ORF6995P | |
| 7005 | GIY-YIG nuclease family protein | |||
| 7925 | DEAD/DEAH box helicase | |||
| 7930 | RM | BbiBGN4ORF857P (100% identity) | Bfi002ORF7930P | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4170 | 166 aa hypothetical protein | |||
| 4175 | R | Bbi4319ORF105P (99% identity) | Bfi002ORF4175P | |
| 4180 | (deoxy)nucleoside triphosphate | |||