Escherichia coli O157:H7 FLT_2008D |
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Putative Escherichia coli O157:H7 FLT_2008D RM systems
Ref: Bono,J.L. and Weinroth,M.D. unpublished
REBASE ref # 31843
| Sequence length: | GenBank #: | |
| Chromosome: | 5,478,292 bp | CP051806 |
| plasmid pFLT_2008D-1: | 95,905 bp | CP051807 |
REBASE acronym: Eco2008D
Org_num: 46686
All begin HH250_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24070 | DUF262 domain-containing protein | |||
| 24075 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco2008DORF24080P |
| 24080 | M | M.EcoPT54II (100% identity) | CACNNNNNNNCTGG | M.Eco2008DORF24080P |
| 24085 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco2008DORF24080P |
| 24090 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2265 | cell division protein DamX | |||
| 2270 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco2008DDamP |
| 2275 | ribulose-phosphate 3-epimerase | |||
| 2785 | DUF2556 family protein | |||
| 2790 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco2008DORF2790P |
| 2795 | DNA-binding transcriptional regulator Fis | |||
| 7455 | DUF1382 family protein | |||
| 7460 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco2008DORF7460P |
| 7465 | 55 aa hypothetical protein | |||
| 7635 | endonuclease | |||
| 7640 | M | M.EcoTWORF3263P (100% identity) | GATC | M.Eco2008DORF7640P |
| 7645 | NinE family protein | |||
| 10345 | recombination protein NinB | |||
| 10350 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco2008DORF10350P |
| 10355 | NinE family protein | |||
| 11880 | TrmB family transcriptional regulator | |||
| 11885 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco2008DORF11885P | |
| 11900 | DUF1737 domain-containing protein | |||
| 16390 | drug/metabolite exporter YedA | |||
| 16395 | V | V.EcosPA8DcmP (100% identity) | V.Eco2008DDcmP | |
| 16400 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco2008DDcmP |
| 16405 | phosphohydrolase | |||
| 24305 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco2008DORF24305P |
| 24310 | DEAD/DEAH box helicase | |||
| 24340 | N-acetylneuraminate epimerase | |||
| 24345 | R | EcosPA8ORF17350P (100% identity) | Eco2008DORF24345P | |
| 24350 | transposase | |||
| plasmid pFLT_2008D-1 | ||||
| 27420 | 73 aa hypothetical protein | |||
| 27425 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco2008DORF27425P | |
| 27430 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24090 | endoribonuclease SymE | |||
| 24095 | R | EcosPA8GmrSDP (55% identity) | Eco2008DGmrDP | |
| 24100 | R | Ecos1613GmrSP (100% identity) | Eco2008DGmrSP | |
| 24105 | DUF1127 domain-containing protein | |||