Escherichia coli O157:H7 FLT_2018C |
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Putative Escherichia coli O157:H7 FLT_2018C RM systems
Ref: Bono,J.L. and Weinroth,M.D. unpublished
REBASE ref # 31843
| Sequence length: | GenBank #: | |
| Chromosome: | 5,575,196 bp | CP051782 |
| plasmid pFLT_2018C-1: | 95,632 bp | CP051785 |
REBASE acronym: Eco2018C
Org_num: 46696
All begin HH241_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3175 | endoribonuclease SymE | |||
| 3180 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco2018CORF3185P |
| 3185 | M | M.EcoPT54II (100% identity) | CACNNNNNNNCTGG | M.Eco2018CORF3185P |
| 3190 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco2018CORF3185P |
| 3195 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1650 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco2018CORF1655P | |
| 1660 | Eae protein | |||
| 2835 | integrase arm-type DNA-binding domain-containing | |||
| 2840 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.Eco2018CORF2850P |
| 2845 | R | EcoZ1836ORF24740P (100% identity) | RGGNCCY | Eco2018CORF2850P |
| 2850 | M | M.EcoZ1836ORF24740P (100% identity) | RGGNCCY | M.Eco2018CORF2850P |
| 2855 | Polarity suppression protein | |||
| 2910 | transposase | |||
| 2915 | R | Ecos1613ORF26795P (100% identity) | Eco2018CORF2915P | |
| 2920 | N-acetylneuraminate epimerase | |||
| 2955 | DEAD/DEAH box helicase | |||
| 2960 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco2018CORF2960P |
| 4870 | PerC family transcriptional regulator | |||
| 4875 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.Eco2018CORF4875P |
| 4880 | LexA family transcriptional regulator | |||
| 11180 | TrmB family transcriptional regulator | |||
| 11185 | M | M.EcoZ1836ORF13250P (100% identity) | M.Eco2018CORF11185P | |
| 11190 | DUF1737 domain-containing protein | |||
| 12355 | TrmB family transcriptional regulator | |||
| 12360 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco2018CORF12360P | |
| 12375 | DUF1737 domain-containing protein | |||
| 16940 | drug/metabolite exporter YedA | |||
| 16945 | V | V.EcosPA8DcmP (100% identity) | V.Eco2018CDcmP | |
| 16950 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco2018CDcmP |
| 16955 | phosphohydrolase | |||
| 17765 | NinE family protein | |||
| 17770 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco2018CORF17770P |
| 17775 | recombination protein NinB | |||
| 20210 | NinE family protein | |||
| 20215 | M | M.SflN97ORF15810P (100% identity) | GATC | M.Eco2018CORF20215P |
| 20220 | recombination protein NinB | |||
| 25015 | DNA-binding transcriptional regulator Fis | |||
| 25020 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco2018CORF25020P |
| 25025 | DUF2556 family protein | |||
| 25535 | ribulose-phosphate 3-epimerase | |||
| 25540 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco2018CDamP |
| 25545 | cell division protein DamX | |||
| plasmid pFLT_2018C-1 | ||||
| 28280 | 73 aa hypothetical protein | |||
| 28285 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco2018CORF28285P | |
| 28290 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3160 | DUF1127 domain-containing protein | |||
| 3165 | R | Ecos1613GmrSP (100% identity) | Eco2018CGmrSP | |
| 3170 | R | EcosPA8GmrSDP (55% identity) | Eco2018CGmrDP | |
| 3175 | endoribonuclease SymE | |||