Vibrio parahaemolyticus HP1 |
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Putative Vibrio parahaemolyticus HP1 RM systems
Ref: Prithvisagar,K.S. et al. unpublished
REBASE ref # 32504
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,296,982 bp | CP069236 |
| chromosome 2: | 1,782,942 bp | CP069237 |
REBASE acronym: VpaHP1
Org_num: 49805
All begin JCT84_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 260 | restriction endonuclease subunit S | |||
| 265 | M | M.Vme2478ORFCP (97% identity) | M.VpaHP1ORF265P | |
| 270 | S | S3.Vqu7734ORFFP (57% identity) | S.VpaHP1ORF265P | |
| 275 | DUF2188 domain-containing protein | |||
| 280 | patatin-like phospholipase family protein | |||
| 285 | nucleotidyltransferase | |||
| 290 | R | Vsp36ORF3384P (96% identity) | VpaHP1ORF265P | |
| 295 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 13150 | chitin oligosaccharide deacetylase | |||
| 13155 | R | PspSiA1IP (70% identity) | VpaHP1ORF13160P | |
| 13160 | M | M1.Ksp484ORF25575P (42% identity) | M.VpaHP1ORF13160P | |
| 13165 | 369 aa hypothetical protein | |||
| 13765 | ribulose-phosphate 3-epimerase | |||
| 13770 | M | M.VphVPD14DamP (100% identity) | GATC | M.VpaHP1DamP |
| 13775 | AAA family ATPase | |||
| chromosome 2 | ||||
| 23255 | AAA family ATPase | |||
| 23260 | M | M.VvuMO6ORF3644P (99% identity) | M.VpaHP1ORF23260P | |
| 23265 | R | VvuMO6ORF3644P (98% identity) | VpaHP1ORF23260P | |
| 23270 | relaxase/mobilization nuclease domain-containing | |||